lcl|VRMN01000005.1_cds_KAA8494282.1_4146 (KAA8494282)


Aliases : KAA8494282

Description : Pyruvate dehydrogenase E1 component subunit beta-1, mitochondrial


Gene families : OG_01_0002556 (OrthoFinder) Phylogenetic Tree(s): OG0002556_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000005.1_cds_KAA8494282.1_4146
Cluster HCCA: Cluster_66

Target Alias Description ECC score Gene Family Method Actions
Cre16.g677026 30778135, PDH1 Cellular respiration.pyruvate oxidation.mitochondrial... 0.03 OrthoFinder
Dusal.0886s00003.1 33195361 Transketolase, C-terminal domain; Transketolase-like,... 0.01 OrthoFinder
OT_06G02670.1 No alias Transketolase, C-terminal domain; Transketolase-like,... 0.02 OrthoFinder
Sro453_g146040.1 Contig1693.g15161 Pyruvate dehydrogenase E1 component subunit beta,... 0.02 OrthoFinder
TP11G01550.1 No alias Transketolase, C-terminal domain; Transketolase-like,... 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0001510 RNA methylation IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0004347 glucose-6-phosphate isomerase activity IEP Enrichment
MF GO:0004358 glutamate N-acetyltransferase activity IEP Enrichment
MF GO:0004779 sulfate adenylyltransferase activity IEP Enrichment
MF GO:0004781 sulfate adenylyltransferase (ATP) activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005694 chromosome IEP Enrichment
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Enrichment
BP GO:0006006 glucose metabolic process IEP Enrichment
BP GO:0006094 gluconeogenesis IEP Enrichment
BP GO:0006399 tRNA metabolic process IEP Enrichment
BP GO:0006400 tRNA modification IEP Enrichment
BP GO:0006525 arginine metabolic process IEP Enrichment
BP GO:0006526 arginine biosynthetic process IEP Enrichment
BP GO:0008033 tRNA processing IEP Enrichment
MF GO:0008175 tRNA methyltransferase activity IEP Enrichment
BP GO:0009064 glutamine family amino acid metabolic process IEP Enrichment
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Enrichment
BP GO:0009451 RNA modification IEP Enrichment
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP Enrichment
MF GO:0015078 proton transmembrane transporter activity IEP Enrichment
MF GO:0016426 tRNA (adenine) methyltransferase activity IEP Enrichment
MF GO:0016429 tRNA (adenine-N1-)-methyltransferase activity IEP Enrichment
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Enrichment
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Enrichment
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Enrichment
BP GO:0019319 hexose biosynthetic process IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
MF GO:0019829 ATPase-coupled cation transmembrane transporter activity IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
CC GO:0019867 outer membrane IEP Enrichment
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Enrichment
BP GO:0030488 tRNA methylation IEP Enrichment
MF GO:0031369 translation initiation factor binding IEP Enrichment
CC GO:0031515 tRNA (m1A) methyltransferase complex IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP Enrichment
BP GO:0034220 ion transmembrane transport IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
CC GO:0034708 methyltransferase complex IEP Enrichment
MF GO:0042625 ATPase-coupled ion transmembrane transporter activity IEP Enrichment
BP GO:0043414 macromolecule methylation IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
CC GO:0043527 tRNA methyltransferase complex IEP Enrichment
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP Enrichment
BP GO:0046364 monosaccharide biosynthetic process IEP Enrichment
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEP Enrichment
MF GO:0070566 adenylyltransferase activity IEP Enrichment
BP GO:0098655 cation transmembrane transport IEP Enrichment
BP GO:0098660 inorganic ion transmembrane transport IEP Enrichment
BP GO:0098662 inorganic cation transmembrane transport IEP Enrichment
BP GO:1902600 proton transmembrane transport IEP Enrichment
InterPro domains Description Start Stop
IPR033248 Transketolase_C 250 373
IPR005475 Transketolase-like_Pyr-bd 56 231
No external refs found!