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Aliases : KAA8494750
Description : Putative rRNA methyltransferase YlbH
Gene families : OG_01_0003840 (OrthoFinder) Phylogenetic Tree(s): OG0003840_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: lcl|VRMN01000004.1_cds_KAA8494750.1_3280 | |
| Cluster | HCCA: Cluster_66 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cpa|evm.model.tig00000269.115 | tig00000269_g23778.t1 | No description available | 0.05 | OrthoFinder | |
| Cre13.g566300 | 30784315 | No description available | 0.08 | OrthoFinder | |
| Dusal.0175s00019.1 | 33199707 | Conserved hypothetical protein 95 [Interproscan]. | 0.01 | OrthoFinder | |
| PTI_31G00710.1 | No alias | Conserved hypothetical protein 95 [Interproscan]. | 0.02 | OrthoFinder | |
| Sro84_g044910.1 | Contig220.g2624 | Hypothetical protein 95 | 0.02 | OrthoFinder | |
| TP01G01320.1 | No alias | Conserved hypothetical protein 95 [Interproscan]. | 0.03 | OrthoFinder | |
| XM_002504905.1 | MICPUN_72338, 72338 | Conserved hypothetical protein 95 [Interproscan]. | 0.07 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | Enrichment |
| BP | GO:0000462 | maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | IEP | Enrichment |
| MF | GO:0003674 | molecular_function | IEP | Enrichment |
| MF | GO:0003676 | nucleic acid binding | IEP | Enrichment |
| MF | GO:0003723 | RNA binding | IEP | Enrichment |
| MF | GO:0003747 | translation release factor activity | IEP | Enrichment |
| MF | GO:0003824 | catalytic activity | IEP | Enrichment |
| MF | GO:0003852 | 2-isopropylmalate synthase activity | IEP | Enrichment |
| MF | GO:0003922 | GMP synthase (glutamine-hydrolyzing) activity | IEP | Enrichment |
| MF | GO:0004055 | argininosuccinate synthase activity | IEP | Enrichment |
| MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | Enrichment |
| MF | GO:0005488 | binding | IEP | Enrichment |
| MF | GO:0005525 | GTP binding | IEP | Enrichment |
| CC | GO:0005634 | nucleus | IEP | Enrichment |
| CC | GO:0005730 | nucleolus | IEP | Enrichment |
| BP | GO:0006082 | organic acid metabolic process | IEP | Enrichment |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Enrichment |
| BP | GO:0006177 | GMP biosynthetic process | IEP | Enrichment |
| BP | GO:0006364 | rRNA processing | IEP | Enrichment |
| BP | GO:0006396 | RNA processing | IEP | Enrichment |
| BP | GO:0006399 | tRNA metabolic process | IEP | Enrichment |
| BP | GO:0006415 | translational termination | IEP | Enrichment |
| BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | Enrichment |
| BP | GO:0006520 | cellular amino acid metabolic process | IEP | Enrichment |
| BP | GO:0006525 | arginine metabolic process | IEP | Enrichment |
| BP | GO:0006526 | arginine biosynthetic process | IEP | Enrichment |
| BP | GO:0006551 | leucine metabolic process | IEP | Enrichment |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Enrichment |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | Enrichment |
| MF | GO:0008079 | translation termination factor activity | IEP | Enrichment |
| MF | GO:0008134 | transcription factor binding | IEP | Enrichment |
| MF | GO:0008135 | translation factor activity, RNA binding | IEP | Enrichment |
| BP | GO:0008150 | biological_process | IEP | Enrichment |
| MF | GO:0008168 | methyltransferase activity | IEP | Enrichment |
| MF | GO:0008173 | RNA methyltransferase activity | IEP | Enrichment |
| BP | GO:0008652 | cellular amino acid biosynthetic process | IEP | Enrichment |
| BP | GO:0009064 | glutamine family amino acid metabolic process | IEP | Enrichment |
| BP | GO:0009084 | glutamine family amino acid biosynthetic process | IEP | Enrichment |
| BP | GO:0009092 | homoserine metabolic process | IEP | Enrichment |
| BP | GO:0009098 | leucine biosynthetic process | IEP | Enrichment |
| BP | GO:0009123 | nucleoside monophosphate metabolic process | IEP | Enrichment |
| BP | GO:0009124 | nucleoside monophosphate biosynthetic process | IEP | Enrichment |
| BP | GO:0009126 | purine nucleoside monophosphate metabolic process | IEP | Enrichment |
| BP | GO:0009127 | purine nucleoside monophosphate biosynthetic process | IEP | Enrichment |
| BP | GO:0009156 | ribonucleoside monophosphate biosynthetic process | IEP | Enrichment |
| BP | GO:0009161 | ribonucleoside monophosphate metabolic process | IEP | Enrichment |
| BP | GO:0009167 | purine ribonucleoside monophosphate metabolic process | IEP | Enrichment |
| BP | GO:0009168 | purine ribonucleoside monophosphate biosynthetic process | IEP | Enrichment |
| BP | GO:0009987 | cellular process | IEP | Enrichment |
| BP | GO:0016053 | organic acid biosynthetic process | IEP | Enrichment |
| BP | GO:0016070 | RNA metabolic process | IEP | Enrichment |
| BP | GO:0016072 | rRNA metabolic process | IEP | Enrichment |
| MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | Enrichment |
| MF | GO:0016805 | dipeptidase activity | IEP | Enrichment |
| MF | GO:0016874 | ligase activity | IEP | Enrichment |
| MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | Enrichment |
| MF | GO:0016879 | ligase activity, forming carbon-nitrogen bonds | IEP | Enrichment |
| MF | GO:0016884 | carbon-nitrogen ligase activity, with glutamine as amido-N-donor | IEP | Enrichment |
| MF | GO:0017076 | purine nucleotide binding | IEP | Enrichment |
| MF | GO:0019001 | guanyl nucleotide binding | IEP | Enrichment |
| BP | GO:0019346 | transsulfuration | IEP | Enrichment |
| BP | GO:0019752 | carboxylic acid metabolic process | IEP | Enrichment |
| BP | GO:0022411 | cellular component disassembly | IEP | Enrichment |
| BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | Enrichment |
| BP | GO:0030490 | maturation of SSU-rRNA | IEP | Enrichment |
| MF | GO:0030515 | snoRNA binding | IEP | Enrichment |
| CC | GO:0030684 | preribosome | IEP | Enrichment |
| CC | GO:0030688 | preribosome, small subunit precursor | IEP | Enrichment |
| CC | GO:0032040 | small-subunit processome | IEP | Enrichment |
| MF | GO:0032553 | ribonucleotide binding | IEP | Enrichment |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | Enrichment |
| MF | GO:0032561 | guanyl ribonucleotide binding | IEP | Enrichment |
| BP | GO:0032984 | protein-containing complex disassembly | IEP | Enrichment |
| BP | GO:0034470 | ncRNA processing | IEP | Enrichment |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Enrichment |
| BP | GO:0034660 | ncRNA metabolic process | IEP | Enrichment |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Enrichment |
| MF | GO:0036094 | small molecule binding | IEP | Enrichment |
| BP | GO:0042254 | ribosome biogenesis | IEP | Enrichment |
| BP | GO:0043038 | amino acid activation | IEP | Enrichment |
| BP | GO:0043039 | tRNA aminoacylation | IEP | Enrichment |
| MF | GO:0043168 | anion binding | IEP | Enrichment |
| CC | GO:0043226 | organelle | IEP | Enrichment |
| CC | GO:0043227 | membrane-bounded organelle | IEP | Enrichment |
| CC | GO:0043229 | intracellular organelle | IEP | Enrichment |
| CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | Enrichment |
| BP | GO:0043436 | oxoacid metabolic process | IEP | Enrichment |
| BP | GO:0043624 | cellular protein complex disassembly | IEP | Enrichment |
| BP | GO:0044085 | cellular component biogenesis | IEP | Enrichment |
| BP | GO:0044237 | cellular metabolic process | IEP | Enrichment |
| BP | GO:0044238 | primary metabolic process | IEP | Enrichment |
| BP | GO:0044281 | small molecule metabolic process | IEP | Enrichment |
| MF | GO:0045182 | translation regulator activity | IEP | Enrichment |
| BP | GO:0046037 | GMP metabolic process | IEP | Enrichment |
| BP | GO:0046394 | carboxylic acid biosynthetic process | IEP | Enrichment |
| BP | GO:0046483 | heterocycle metabolic process | IEP | Enrichment |
| BP | GO:0050667 | homocysteine metabolic process | IEP | Enrichment |
| BP | GO:0071840 | cellular component organization or biogenesis | IEP | Enrichment |
| MF | GO:0090079 | translation regulator activity, nucleic acid binding | IEP | Enrichment |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Enrichment |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Enrichment |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | Enrichment |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | Enrichment |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | Enrichment |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | Enrichment |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Enrichment |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Enrichment |
| BP | GO:1901605 | alpha-amino acid metabolic process | IEP | Enrichment |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | Enrichment |
No InterPro domains available for this sequence
| No external refs found! |