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  5. lcl|VRMN01000004.1_cds_KAA8494591.1_3121

lcl|VRMN01000004.1_cds_KAA8494591.1_3121 (KAA8494591)


Aliases : KAA8494591

Description : 60S ribosomal protein L32


Gene families : OG_01_0003368 (OrthoFinder) Phylogenetic Tree(s): OG0003368_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000004.1_cds_KAA8494591.1_3121
Cluster HCCA: Cluster_105

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020554.140 tig00020554_g10919.t1 Protein biosynthesis.cytosolic ribosome.large subunit... 0.14 OrthoFinder
Cre06.g289550 30780114, RPL32 Protein biosynthesis.cytosolic ribosome.large subunit... 0.22 OrthoFinder
Cz11g16180.t1 No alias Ribosomal protein L32e [Interproscan]. 0.12 OrthoFinder
Dusal.0931s00005.1 33189912 Ribosomal protein L32e [Interproscan]. 0.06 OrthoFinder
EOD35360 No alias Ribosomal protein L32e [Interproscan]. 0.1 OrthoFinder
EOD35362 No alias Ribosomal protein L32e [Interproscan]. 0.1 OrthoFinder
OT_04G01320.1 No alias Ribosomal protein L32e [Interproscan]. 0.09 OrthoFinder
PTI_13G03600.1 No alias Ribosomal protein L32e [Interproscan]. 0.15 OrthoFinder
Sro182_g079470.1 Contig1301.g12083 60S ribosomal protein L32 0.16 OrthoFinder
SymbC1.scaffold5627.3 5627.3 Ribosomal protein L32e [Interproscan]. 0.05 OrthoFinder
TP12G00110.1 No alias Ribosomal protein L32e [Interproscan]. 0.18 OrthoFinder
Vocar.0001s1497.1 32884164 Ribosomal protein L32e [Interproscan]. 0.13 OrthoFinder
XM_002508155.1 MICPUN_91456, 91456 Ribosomal protein L32e [Interproscan]. 0.14 OrthoFinder
XM_003057642.1 MicpuC2_49537, 49537 Ribosomal protein L32e [Interproscan]. 0.05 OrthoFinder
lcl|BLLF01000296.1_cds_GFH10216.1_4693 HaLaN_05489, GFH10216 Ribosomal protein L32e [Interproscan]. 0.06 OrthoFinder
lcl|LHPG02000013.1_cds_PRW44541.1_2370 PRW44541 60S ribosomal L32-1 0.11 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
CC GO:0015934 large ribosomal subunit IEP Enrichment
BP GO:0030490 maturation of SSU-rRNA IEP Enrichment
MF GO:0030515 snoRNA binding IEP Enrichment
CC GO:0044391 ribosomal subunit IEP Enrichment
InterPro domains Description Start Stop
IPR001515 Ribosomal_L32e 15 122
No external refs found!