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  5. lcl|VRMN01000004.1_cds_KAA8494573.1_3103

lcl|VRMN01000004.1_cds_KAA8494573.1_3103 (KAA8494573)


Aliases : KAA8494573

Description : Valine--tRNA ligase


Gene families : OG_01_0000866 (OrthoFinder) Phylogenetic Tree(s): OG0000866_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000004.1_cds_KAA8494573.1_3103
Cluster HCCA: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
Cre12.g537100 30793066 Protein biosynthesis.aminoacyl-tRNA synthetase... 0.02 OrthoFinder
Cz06g08200.t1 No alias Aminoacyl-tRNA synthetase, class Ia; Valyl-tRNA... 0.01 OrthoFinder
Dusal.0452s00014.1 33191422 Aminoacyl-tRNA synthetase, class Ia [Interproscan]. 0.01 OrthoFinder
EOD05767 No alias Putative valyl-tRNA synthetase [Ensembl]. 0.01 OrthoFinder
EOD17893 No alias Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase,... 0.04 OrthoFinder
OT_03G02900.1 No alias Aminoacyl-tRNA synthetase, class Ia;... 0.02 OrthoFinder
PTI_01G08390.1 No alias Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase,... 0.03 OrthoFinder
Sro408_g136830.1 Contig3193.g25218 Valine--tRNA ligase (Fragment) 0.05 OrthoFinder
Sro427_g140590.1 Contig2653.g21430 Valine--tRNA ligase 0.01 OrthoFinder
TP18G02600.1 No alias Aminoacyl-tRNA synthetase, class Ia;... 0.02 OrthoFinder
TP20G01590.1 No alias Aminoacyl-tRNA synthetase, class Ia;... 0.01 OrthoFinder
XM_002501649.1 MICPUN_96323, 96323 Valyl-tRNA synthetase, tRNA-binding arm; Aminoacyl-tRNA... 0.02 OrthoFinder
XM_003062580.1 MicpuC2_45875, 45875 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase,... 0.02 OrthoFinder
lcl|BLLF01000476.1_cds_GFH12175.1_6652 HaLaN_07812, GFH12175 Aminoacyl-tRNA synthetase, class Ia [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEA Interproscan
MF GO:0004812 aminoacyl-tRNA ligase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006418 tRNA aminoacylation for protein translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003743 translation initiation factor activity IEP Enrichment
MF GO:0004814 arginine-tRNA ligase activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005737 cytoplasm IEP Enrichment
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Enrichment
BP GO:0006420 arginyl-tRNA aminoacylation IEP Enrichment
MF GO:0008135 translation factor activity, RNA binding IEP Enrichment
CC GO:0030684 preribosome IEP Enrichment
CC GO:0032040 small-subunit processome IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
MF GO:0045182 translation regulator activity IEP Enrichment
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Enrichment
CC GO:1990904 ribonucleoprotein complex IEP Enrichment
InterPro domains Description Start Stop
IPR002300 aa-tRNA-synth_Ia 135 761
IPR013155 M/V/L/I-tRNA-synth_anticd-bd 811 971
No external refs found!