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  5. lcl|VRMN01000004.1_cds_KAA8494550.1_3080

lcl|VRMN01000004.1_cds_KAA8494550.1_3080 (KAA8494550)


Aliases : KAA8494550

Description : DNA replication licensing factor MCM5


Gene families : OG_01_0003992 (OrthoFinder) Phylogenetic Tree(s): OG0003992_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000004.1_cds_KAA8494550.1_3080
Cluster HCCA: Cluster_35

Target Alias Description ECC score Gene Family Method Actions
Cre01.g023150 30789174, MCM5 Cell cycle.interphase.DNA replication.preinitiation.MCM... 0.06 OrthoFinder
Cz07g07100.t1 No alias MCM, AAA-lid domain; MCM OB domain; MCM domain [Interproscan]. 0.09 OrthoFinder
OT_04G00460.1 No alias MCM, AAA-lid domain; MCM domain; MCM N-terminal domain;... 0.06 OrthoFinder
PTI_05G00150.1 No alias MCM domain; MCM, AAA-lid domain; MCM OB domain [Interproscan]. 0.04 OrthoFinder
Sro2445_g327910.1 Contig786.g8798 Zygotic DNA replication licensing factor mcm3 0.03 OrthoFinder
Transcript_contig_67480 67480 MCM, AAA-lid domain; MCM domain; MCM N-terminal domain;... 0.06 OrthoFinder
Vocar.0007s0287.1 32887930 MCM N-terminal domain; MCM, AAA-lid domain; MCM OB... 0.05 OrthoFinder
XM_002504696.1 MICPUN_84917, 84917 MCM domain; MCM, AAA-lid domain; MCM OB domain; MCM... 0.03 OrthoFinder
lcl|BLLF01002005.1_cds_GFH22273.1_16750 HaLaN_19715, GFH22273 DNA helicase 0.05 OrthoFinder
lcl|LHPG02000009.1_cds_PRW55991.1_10189 PRW55991 DNA replication licensing factor MCM5 0.06 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006270 DNA replication initiation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003713 transcription coactivator activity IEP Enrichment
MF GO:0003872 6-phosphofructokinase activity IEP Enrichment
MF GO:0003887 DNA-directed DNA polymerase activity IEP Enrichment
MF GO:0003896 DNA primase activity IEP Enrichment
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
CC GO:0005694 chromosome IEP Enrichment
BP GO:0006260 DNA replication IEP Enrichment
BP GO:0006269 DNA replication, synthesis of RNA primer IEP Enrichment
BP GO:0006275 regulation of DNA replication IEP Enrichment
BP GO:0006996 organelle organization IEP Enrichment
MF GO:0008443 phosphofructokinase activity IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0010639 negative regulation of organelle organization IEP Enrichment
MF GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity IEP Enrichment
MF GO:0016779 nucleotidyltransferase activity IEP Enrichment
MF GO:0016805 dipeptidase activity IEP Enrichment
CC GO:0018995 host cellular component IEP Enrichment
MF GO:0019200 carbohydrate kinase activity IEP Enrichment
MF GO:0019207 kinase regulator activity IEP Enrichment
MF GO:0019887 protein kinase regulator activity IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
BP GO:0032780 negative regulation of ATPase activity IEP Enrichment
BP GO:0033043 regulation of organelle organization IEP Enrichment
BP GO:0033044 regulation of chromosome organization IEP Enrichment
CC GO:0033643 host cell part IEP Enrichment
CC GO:0033646 host intracellular part IEP Enrichment
CC GO:0033647 host intracellular organelle IEP Enrichment
CC GO:0033648 host intracellular membrane-bounded organelle IEP Enrichment
MF GO:0034061 DNA polymerase activity IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
CC GO:0042025 host cell nucleus IEP Enrichment
CC GO:0042555 MCM complex IEP Enrichment
BP GO:0043086 negative regulation of catalytic activity IEP Enrichment
BP GO:0043462 regulation of ATPase activity IEP Enrichment
BP GO:0044092 negative regulation of molecular function IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0051095 regulation of helicase activity IEP Enrichment
BP GO:0051097 negative regulation of helicase activity IEP Enrichment
BP GO:0051128 regulation of cellular component organization IEP Enrichment
BP GO:0051129 negative regulation of cellular component organization IEP Enrichment
BP GO:0051276 chromosome organization IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
BP GO:1905462 regulation of DNA duplex unwinding IEP Enrichment
BP GO:1905463 negative regulation of DNA duplex unwinding IEP Enrichment
BP GO:1905774 regulation of DNA helicase activity IEP Enrichment
BP GO:1905775 negative regulation of DNA helicase activity IEP Enrichment
BP GO:2001251 negative regulation of chromosome organization IEP Enrichment
InterPro domains Description Start Stop
IPR001208 MCM_dom 347 570
IPR027925 MCM_N 48 127
IPR033762 MCM_OB 164 300
IPR041562 MCM_lid 608 698
No external refs found!