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  5. lcl|VRMN01000004.1_cds_KAA8494414.1_2944

lcl|VRMN01000004.1_cds_KAA8494414.1_2944 (KAA8494414)


Aliases : KAA8494414

Description : Proteasome subunit alpha type-4-2


Gene families : OG_01_0003437 (OrthoFinder) Phylogenetic Tree(s): OG0003437_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000004.1_cds_KAA8494414.1_2944
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
Cre10.g418100 30789792, POA3 Protein degradation.26S proteasome.20S core... 0.02 OrthoFinder
Cz12g21180.t1 No alias Proteasome, subunit alpha/beta; Proteasome... 0.02 OrthoFinder
EOD41638 No alias Proteasome subunit alpha type [Ensembl]. 0.01 OrthoFinder
PTI_01G02920.1 No alias Proteasome, subunit alpha/beta; Proteasome... 0.03 OrthoFinder
Sro495_g154380.1 Contig3243.g25618 Proteasome subunit alpha type 0.03 OrthoFinder
TP04G07880.1 No alias Proteasome, subunit alpha/beta; Proteasome... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEA Interproscan
MF GO:0004298 threonine-type endopeptidase activity IEA Interproscan
CC GO:0005839 proteasome core complex IEA Interproscan
BP GO:0006511 ubiquitin-dependent protein catabolic process IEA Interproscan
CC GO:0019773 proteasome core complex, alpha-subunit complex IEA Interproscan
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004176 ATP-dependent peptidase activity IEP Enrichment
MF GO:0004252 serine-type endopeptidase activity IEP Enrichment
MF GO:0047429 nucleoside-triphosphate diphosphatase activity IEP Enrichment
InterPro domains Description Start Stop
IPR000426 Proteasome_asu_N 5 27
IPR001353 Proteasome_sua/b 30 214
No external refs found!