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  5. lcl|VRMN01000003.1_cds_KAA8495878.1_1876

lcl|VRMN01000003.1_cds_KAA8495878.1_1876 (KAA8495878)


Aliases : KAA8495878

Description : Pentatricopeptide repeat-containing protein


Gene families : OG_01_0003934 (OrthoFinder) Phylogenetic Tree(s): OG0003934_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000003.1_cds_KAA8495878.1_1876
Cluster HCCA: Cluster_13


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0004749 ribose phosphate diphosphokinase activity IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
BP GO:0006364 rRNA processing IEP Enrichment
BP GO:0006777 Mo-molybdopterin cofactor biosynthetic process IEP Enrichment
BP GO:0016072 rRNA metabolic process IEP Enrichment
MF GO:0016778 diphosphotransferase activity IEP Enrichment
BP GO:0019637 organophosphate metabolic process IEP Enrichment
BP GO:0019720 Mo-molybdopterin cofactor metabolic process IEP Enrichment
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Enrichment
CC GO:0030684 preribosome IEP Enrichment
CC GO:0032040 small-subunit processome IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0042254 ribosome biogenesis IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
BP GO:0043545 molybdopterin cofactor metabolic process IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
BP GO:0051189 prosthetic group metabolic process IEP Enrichment
BP GO:0090407 organophosphate biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR033443 PPR_long 487 639
IPR002885 Pentatricopeptide_repeat 258 317
IPR002885 Pentatricopeptide_repeat 686 742
IPR002885 Pentatricopeptide_repeat 812 870
IPR002885 Pentatricopeptide_repeat 439 471
IPR002885 Pentatricopeptide_repeat 139 183
IPR002885 Pentatricopeptide_repeat 933 960
IPR002885 Pentatricopeptide_repeat 896 923
No external refs found!