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  5. lcl|VRMN01000003.1_cds_KAA8495843.1_1841

lcl|VRMN01000003.1_cds_KAA8495843.1_1841 (KAA8495843)


Aliases : KAA8495843

Description : Putative short/branched chain specific acyl-CoA dehydrogenase


Gene families : OG_01_0000190 (OrthoFinder) Phylogenetic Tree(s): OG0000190_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000003.1_cds_KAA8495843.1_1841
Cluster HCCA: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000711.27 tig00000711_g3387.t1 Isovaleryl-CoA dehydrogenase, mitochondrial OS=Oryza... 0.02 OrthoFinder
Cpa|evm.model.tig00021318.60 tig00021318_g20180.t1 Amino acid metabolism.degradation.branched-chain amino... 0.02 OrthoFinder
Dusal.0407s00006.1 33197900 Acyl-CoA dehydrogenase/oxidase, N-terminal; Acyl-CoA... 0.01 OrthoFinder
PTI_03G00760.1 No alias Acyl-CoA dehydrogenase/oxidase, N-terminal; Acyl-CoA... 0.02 OrthoFinder
Sro1323_g262650.1 Contig273.g3511 Short/branched chain specific acyl-CoA dehydrogenase,... 0.02 OrthoFinder
Sro762_g198700.1 Contig3620.g28011 Isovaleryl-CoA dehydrogenase, mitochondrial 0.03 OrthoFinder
SymbC1.scaffold285.4 285.4 Acyl-CoA dehydrogenase/oxidase, N-terminal; Cytochrome... 0.02 OrthoFinder
SymbC1.scaffold4.1618 4.1618 PEP-CTERM protein-sorting domain; Glyoxalase/fosfomycin... 0.01 OrthoFinder
TP10G02230.1 No alias Acyl-CoA dehydrogenase/oxidase C-terminal; Acyl-CoA... 0.02 OrthoFinder
Transcript_contig_54719 54719 Acyl-CoA dehydrogenase/oxidase, N-terminal; Acyl-CoA... 0.01 OrthoFinder
Transcript_contig_58396 58396 Acyl-CoA dehydrogenase/oxidase, N-terminal; Acyl-CoA... 0.01 OrthoFinder
XM_003058790.1 MicpuC2_33501, 33501 Acyl-CoA dehydrogenase/oxidase, N-terminal; Acyl-CoA... 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEA Interproscan
MF GO:0050660 flavin adenine dinucleotide binding IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004427 inorganic diphosphatase activity IEP Enrichment
MF GO:0004518 nuclease activity IEP Enrichment
MF GO:0004672 protein kinase activity IEP Enrichment
MF GO:0004806 triglyceride lipase activity IEP Enrichment
MF GO:0005215 transporter activity IEP Enrichment
MF GO:0005319 lipid transporter activity IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005737 cytoplasm IEP Enrichment
BP GO:0006464 cellular protein modification process IEP Enrichment
BP GO:0006468 protein phosphorylation IEP Enrichment
BP GO:0006793 phosphorus metabolic process IEP Enrichment
BP GO:0006796 phosphate-containing compound metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0006869 lipid transport IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0008483 transaminase activity IEP Enrichment
BP GO:0009092 homoserine metabolic process IEP Enrichment
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
MF GO:0015399 primary active transmembrane transporter activity IEP Enrichment
MF GO:0016298 lipase activity IEP Enrichment
MF GO:0016301 kinase activity IEP Enrichment
BP GO:0016310 phosphorylation IEP Enrichment
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Enrichment
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
BP GO:0019346 transsulfuration IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
MF GO:0019842 vitamin binding IEP Enrichment
MF GO:0030170 pyridoxal phosphate binding IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
BP GO:0036211 protein modification process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043412 macromolecule modification IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0050667 homocysteine metabolic process IEP Enrichment
BP GO:0061024 membrane organization IEP Enrichment
MF GO:0070279 vitamin B6 binding IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
BP GO:0120009 intermembrane lipid transfer IEP Enrichment
MF GO:0120013 lipid transfer activity IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR013786 AcylCoA_DH/ox_N 73 183
IPR006091 Acyl-CoA_Oxase/DH_cen-dom 188 286
IPR009075 AcylCo_DH/oxidase_C 298 447
No external refs found!