Aliases : KAA8495820
Description : Transposon Ty3-I Gag-Pol polyprotein
Gene families : OG_01_0000071 (OrthoFinder) Phylogenetic Tree(s): OG0000071_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: lcl|VRMN01000003.1_cds_KAA8495820.1_1818 | |
Cluster | HCCA: Cluster_5 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
lcl|VRMN01000001.1_cds_KAA8497670.1_6623 | KAA8497670 | Transposon Ty3-I Gag-Pol polyprotein | 0.04 | OrthoFinder | |
lcl|VRMN01000001.1_cds_KAA8498182.1_7135 | KAA8498182 | Hypothetical protein | 0.07 | OrthoFinder | |
lcl|VRMN01000001.1_cds_KAA8498457.1_7410 | KAA8498457 | Transposon Ty3-I Gag-Pol polyprotein | 0.07 | OrthoFinder | |
lcl|VRMN01000001.1_cds_KAA8498720.1_7673 | KAA8498720 | Transposon Ty3-I Gag-Pol polyprotein | 0.05 | OrthoFinder | |
lcl|VRMN01000001.1_cds_KAA8498877.1_7830 | KAA8498877 | Transposon Ty3-G Gag-Pol polyprotein | 0.04 | OrthoFinder | |
lcl|VRMN01000001.1_cds_KAA8498878.1_7831 | KAA8498878 | Transposon Ty3-I Gag-Pol polyprotein | 0.04 | OrthoFinder | |
lcl|VRMN01000001.1_cds_KAA8499405.1_8358 | KAA8499405 | Retrotransposon-derived protein PEG10 | 0.08 | OrthoFinder | |
lcl|VRMN01000003.1_cds_KAA8495213.1_1211 | KAA8495213 | Transposon Ty3-I Gag-Pol polyprotein | 0.06 | OrthoFinder | |
lcl|VRMN01000003.1_cds_KAA8495319.1_1317 | KAA8495319 | Transposon Ty3-I Gag-Pol polyprotein | 0.06 | OrthoFinder | |
lcl|VRMN01000003.1_cds_KAA8495320.1_1318 | KAA8495320 | Retrotransposon-derived protein PEG10 | 0.04 | OrthoFinder | |
lcl|VRMN01000003.1_cds_KAA8495846.1_1844 | KAA8495846 | Transposon Ty3-I Gag-Pol polyprotein | 0.04 | OrthoFinder | |
lcl|VRMN01000004.1_cds_KAA8494765.1_3295 | KAA8494765 | Transposon Ty3-I Gag-Pol polyprotein | 0.05 | OrthoFinder | |
lcl|VRMN01000005.1_cds_KAA8493898.1_3762 | KAA8493898 | Transposon Ty3-I Gag-Pol polyprotein | 0.05 | OrthoFinder | |
lcl|VRMN01000011.1_cds_KAA8491827.1_4835 | KAA8491827 | Transposon Ty3-I Gag-Pol polyprotein | 0.06 | OrthoFinder | |
lcl|VRMN01000012.1_cds_KAA8491590.1_5058 | KAA8491590 | Transposon Ty3-I Gag-Pol polyprotein | 0.07 | OrthoFinder | |
lcl|VRMN01000014.1_cds_KAA8491407.1_2408 | KAA8491407 | Transposon Ty3-I Gag-Pol polyprotein | 0.06 | OrthoFinder | |
lcl|VRMN01000017.1_cds_KAA8491004.1_6207 | KAA8491004 | Hypothetical protein | 0.04 | OrthoFinder | |
lcl|VRMN01000023.1_cds_KAA8490532.1_5898 | KAA8490532 | Transposon Ty3-I Gag-Pol polyprotein | 0.04 | OrthoFinder | |
lcl|VRMN01000026.1_cds_KAA8490460.1_6406 | KAA8490460 | Hypothetical protein | 0.04 | OrthoFinder | |
lcl|VRMN01000026.1_cds_KAA8490464.1_6410 | KAA8490464 | Transposon Ty3-I Gag-Pol polyprotein | 0.03 | OrthoFinder | |
lcl|VRMN01000028.1_cds_KAA8490418.1_5041 | KAA8490418 | Transposon Ty3-G Gag-Pol polyprotein | 0.07 | OrthoFinder | |
lcl|VRMN01000030.1_cds_KAA8490384.1_3741 | KAA8490384 | Transposon Ty3-I Gag-Pol polyprotein | 0.04 | OrthoFinder | |
lcl|VRMN01000030.1_cds_KAA8490385.1_3742 | KAA8490385 | Transposon Ty3-G Gag-Pol polyprotein | 0.04 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
MF | GO:0008270 | zinc ion binding | IEA | Interproscan |
BP | GO:0015074 | DNA integration | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
No external refs found! |