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  5. lcl|VRMN01000003.1_cds_KAA8495658.1_1656

lcl|VRMN01000003.1_cds_KAA8495658.1_1656 (KAA8495658)


Aliases : KAA8495658

Description : Brefeldin A-inhibited guanine nucleotide-exchange protein 3


Gene families : OG_01_0000548 (OrthoFinder) Phylogenetic Tree(s): OG0000548_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000003.1_cds_KAA8495658.1_1656
Cluster HCCA: Cluster_42

Target Alias Description ECC score Gene Family Method Actions
Cz01g11170.t1 No alias Mon2, dimerisation and cyclophilin-binding domain; Sec7,... 0.03 OrthoFinder
EOD15754 No alias BIG1, ArfGEF of the BIG/SEC7 subfamily [Ensembl]. 0.02 OrthoFinder
Sro63_g035620.1 Contig2778.g22327 Inhibited guanine nucleotide-exchange protein 1 0.01 OrthoFinder
Transcript_contig_56507 56507 Mon2, dimerisation and cyclophilin-binding domain [Interproscan]. 0.01 OrthoFinder
Transcript_contig_90466 90466 Sec7, C-terminal; Sec7 domain [Interproscan]. 0.01 OrthoFinder
Vocar.0056s0013.1 32896661 Mon2, dimerisation and cyclophilin-binding domain; Sec7... 0.02 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0032012 regulation of ARF protein signal transduction IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000959 mitochondrial RNA metabolic process IEP Enrichment
BP GO:0001522 pseudouridine synthesis IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003968 RNA-directed 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0004518 nuclease activity IEP Enrichment
MF GO:0004527 exonuclease activity IEP Enrichment
MF GO:0005049 nuclear export signal receptor activity IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
CC GO:0005732 sno(s)RNA-containing ribonucleoprotein complex IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006813 potassium ion transport IEP Enrichment
MF GO:0008408 3'-5' exonuclease activity IEP Enrichment
MF GO:0008483 transaminase activity IEP Enrichment
BP GO:0009451 RNA modification IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Enrichment
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
CC GO:0034457 Mpp10 complex IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
MF GO:0140104 molecular carrier activity IEP Enrichment
MF GO:0140142 nucleocytoplasmic carrier activity IEP Enrichment
MF GO:0140597 protein carrier activity IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR015403 Sec7_C 1259 1340
IPR000904 Sec7_dom 675 856
IPR032691 Sec7_N 394 552
No external refs found!