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  5. lcl|VRMN01000003.1_cds_KAA8495633.1_1631

lcl|VRMN01000003.1_cds_KAA8495633.1_1631 (KAA8495633)


Aliases : KAA8495633

Description : Protease Do-like 1, chloroplastic


Gene families : OG_01_0000099 (OrthoFinder) Phylogenetic Tree(s): OG0000099_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000003.1_cds_KAA8495633.1_1631
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
Cre12.g498500 30793568, DEG11 Protein degradation.peptidase families.serine-type... 0.03 OrthoFinder
EOD07113 No alias PDZ domain; Trypsin-like peptidase domain [Interproscan]. 0.02 OrthoFinder
EOD16062 No alias PDZ domain; Trypsin-like peptidase domain [Interproscan]. 0.03 OrthoFinder
EOD22299 No alias PDZ domain 6; Trypsin-like peptidase domain [Interproscan]. 0.02 OrthoFinder
Sro400_g134980.1 Contig1256.g11741 Probable periplasmic serine endoprotease DegP-like 0.04 OrthoFinder
XM_002505564.1 MICPUN_109418, 109418 PDZ domain; Trypsin-like peptidase domain [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01000410.1_cds_GFH11514.1_5991 HaLaN_07022, GFH11514 Protease Do-like 1, chloroplastic 0.01 OrthoFinder
lcl|BLLF01000752.1_cds_GFH14668.1_9145 HaLaN_10767, GFH14668 PDZ domain-containing protein 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Enrichment
BP GO:0000097 sulfur amino acid biosynthetic process IEP Enrichment
MF GO:0003871 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity IEP Enrichment
MF GO:0005215 transporter activity IEP Enrichment
BP GO:0006555 methionine metabolic process IEP Enrichment
BP GO:0006810 transport IEP Enrichment
MF GO:0008168 methyltransferase activity IEP Enrichment
MF GO:0008172 S-methyltransferase activity IEP Enrichment
BP GO:0009066 aspartate family amino acid metabolic process IEP Enrichment
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Enrichment
BP GO:0009086 methionine biosynthetic process IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
CC GO:0018995 host cellular component IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
CC GO:0030014 CCR4-NOT complex IEP Enrichment
CC GO:0033643 host cell part IEP Enrichment
CC GO:0033646 host intracellular part IEP Enrichment
CC GO:0033647 host intracellular organelle IEP Enrichment
CC GO:0033648 host intracellular membrane-bounded organelle IEP Enrichment
CC GO:0042025 host cell nucleus IEP Enrichment
MF GO:0042085 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity IEP Enrichment
MF GO:0043565 sequence-specific DNA binding IEP Enrichment
BP GO:0044272 sulfur compound biosynthetic process IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
InterPro domains Description Start Stop
IPR001478 PDZ 347 444
No external refs found!