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  5. lcl|VRMN01000003.1_cds_KAA8495609.1_1607

lcl|VRMN01000003.1_cds_KAA8495609.1_1607 (KAA8495609)


Aliases : KAA8495609

Description : CAD protein


Gene families : OG_01_0000742 (OrthoFinder) Phylogenetic Tree(s): OG0000742_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000003.1_cds_KAA8495609.1_1607
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
Cre08.g358580 30774147, CMP1 Nucleotide metabolism.pyrimidines.ribonucleotide... 0.01 OrthoFinder
SymbC1.scaffold17943.2 17943.2 Carbamoyl-phosphate synthetase large subunit-like,... 0.03 OrthoFinder
Vocar.0064s0016.1 32897721 Methylglyoxal synthase-like domain; Carbamoyl-phosphate... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006520 cellular amino acid metabolic process IEA Interproscan
MF GO:0016597 amino acid binding IEA Interproscan
MF GO:0016743 carboxyl- or carbamoyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004177 aminopeptidase activity IEP Enrichment
MF GO:0008238 exopeptidase activity IEP Enrichment
MF GO:0010181 FMN binding IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
InterPro domains Description Start Stop
IPR006132 Asp/Orn_carbamoyltranf_P-bd 1989 2131
IPR017926 GATASE 197 389
IPR011607 MGS-like_dom 1388 1485
IPR005479 CbamoylP_synth_lsu-like_ATP-bd 1107 1305
IPR005479 CbamoylP_synth_lsu-like_ATP-bd 547 749
IPR006131 Asp_carbamoyltransf_Asp/Orn-bd 2138 2287
IPR005480 CarbamoylP_synth_lsu_oligo 836 970
IPR002474 CarbamoylP_synth_ssu_N 12 151
No external refs found!