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  5. lcl|VRMN01000003.1_cds_KAA8495410.1_1408

lcl|VRMN01000003.1_cds_KAA8495410.1_1408 (KAA8495410)


Aliases : KAA8495410

Description : DNA gyrase subunit A


Gene families : OG_01_0001135 (OrthoFinder) Phylogenetic Tree(s): OG0001135_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000003.1_cds_KAA8495410.1_1408
Cluster HCCA: Cluster_93

Target Alias Description ECC score Gene Family Method Actions
PTI_03G06660.1 No alias DNA gyrase/topoisomerase IV, subunit A, C-terminal... 0.03 OrthoFinder
TP03G02690.1 No alias DNA topoisomerase, type IIA, subunit A/C-terminal; DNA... 0.04 OrthoFinder
XM_003062654.1 MicpuC2_52348, 52348 High mobility group box domain; DNA gyrase/topoisomerase... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0003916 DNA topoisomerase activity IEA Interproscan
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006265 DNA topological change IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Enrichment
MF GO:0003774 motor activity IEP Enrichment
MF GO:0003777 microtubule motor activity IEP Enrichment
MF GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity IEP Enrichment
MF GO:0004601 peroxidase activity IEP Enrichment
MF GO:0004602 glutathione peroxidase activity IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
BP GO:0006534 cysteine metabolic process IEP Enrichment
BP GO:0006928 movement of cell or subcellular component IEP Enrichment
BP GO:0006979 response to oxidative stress IEP Enrichment
BP GO:0007017 microtubule-based process IEP Enrichment
BP GO:0007018 microtubule-based movement IEP Enrichment
MF GO:0008017 microtubule binding IEP Enrichment
MF GO:0008092 cytoskeletal protein binding IEP Enrichment
MF GO:0008168 methyltransferase activity IEP Enrichment
MF GO:0008171 O-methyltransferase activity IEP Enrichment
MF GO:0008234 cysteine-type peptidase activity IEP Enrichment
BP GO:0009069 serine family amino acid metabolic process IEP Enrichment
BP GO:0009072 aromatic amino acid family metabolic process IEP Enrichment
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Enrichment
BP GO:0009092 homoserine metabolic process IEP Enrichment
MF GO:0015631 tubulin binding IEP Enrichment
MF GO:0016209 antioxidant activity IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
BP GO:0019346 transsulfuration IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
BP GO:0050667 homocysteine metabolic process IEP Enrichment
MF GO:0051082 unfolded protein binding IEP Enrichment
InterPro domains Description Start Stop
IPR006691 GyrA/parC_rep 643 694
IPR006691 GyrA/parC_rep 806 851
IPR006691 GyrA/parC_rep 593 633
IPR006691 GyrA/parC_rep 748 797
IPR006691 GyrA/parC_rep 701 738
IPR006691 GyrA/parC_rep 855 901
IPR002205 Topo_IIA_A/C 115 558
No external refs found!