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  5. lcl|VRMN01000003.1_cds_KAA8495290.1_1288

lcl|VRMN01000003.1_cds_KAA8495290.1_1288 (KAA8495290)


Aliases : KAA8495290

Description : Histone H3


Gene families : OG_01_0000015 (OrthoFinder) Phylogenetic Tree(s): OG0000015_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000003.1_cds_KAA8495290.1_1288
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
Cre06.g264650 30779911, HTR27 Chromatin organisation.histones.H3-type histone 0.04 OrthoFinder
Cre06.g265000 30778874 Chromatin organisation.histones.H3-type histone 0.04 OrthoFinder
Cre06.g265250 30779294 Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder
Cre06.g265500 30778907 Chromatin organisation.histones.H3-type histone 0.03 OrthoFinder
Cre06.g266650 30779741 Chromatin organisation.histones.H3-type histone 0.04 OrthoFinder
Cre06.g267950 30779543, HTR10 Chromatin organisation.histones.H3-type histone 0.03 OrthoFinder
Cre06.g268350 30778762, HTR9 Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder
Cre06.g274000 30779747, HTR7 Chromatin organisation.histones.H3-type histone 0.03 OrthoFinder
Cre06.g274101 30779608 Chromatin organisation.histones.H3-type histone 0.03 OrthoFinder
Cre06.g274350 30778588, HTR29 Chromatin organisation.histones.H3-type histone 0.04 OrthoFinder
Cre06.g274850 30778497 Chromatin organisation.histones.H3-type histone 0.04 OrthoFinder
Cre06.g275750 30779137 Chromatin organisation.histones.H3-type histone 0.04 OrthoFinder
Cre06.g276600 30779595 Chromatin organisation.histones.H3-type histone 0.03 OrthoFinder
Cre06.g276850 30778983, HTR24 Chromatin organisation.histones.H3-type histone 0.03 OrthoFinder
Cre12.g504650 30791932 Chromatin organisation.histones.H3-type histone 0.04 OrthoFinder
Cre12.g504800 30793536, HTR16 Chromatin organisation.histones.H3-type histone 0.04 OrthoFinder
Cre12.g505500 30793498, HTR17 Chromatin organisation.histones.H3-type histone 0.04 OrthoFinder
Cre12.g506300 30792290, HTR18 Chromatin organisation.histones.H3-type histone 0.04 OrthoFinder
Cre12.g506500 30792666, HTR35 Chromatin organisation.histones.H3-type histone 0.04 OrthoFinder
Cre13.g569950 30784075, HTR2 Chromatin organisation.histones.H3-type histone 0.04 OrthoFinder
Cre16.g649900 30777869, HTR40 Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder
Cre16.g650300 30777639, HTR39 Chromatin organisation.histones.H3-type histone 0.03 OrthoFinder
Cre17.g708150 30782647, HTR36 Chromatin organisation.histones.H3-type histone 0.04 OrthoFinder
Cre17.g708700 30782453, HTR20 Chromatin organisation.histones.H3-type histone 0.03 OrthoFinder
Cre17.g709050 30782593, HTR3 Chromatin organisation.histones.H3-type histone 0.04 OrthoFinder
Cz05g04150.t1 No alias Histone H2A/H2B/H3 [Interproscan]. 0.02 OrthoFinder
Cz07g08150.t1 No alias Histone H2A/H2B/H3 [Interproscan]. 0.03 OrthoFinder
Cz08g27160.t1 No alias Histone H2A/H2B/H3 [Interproscan]. 0.02 OrthoFinder
Cz13g04210.t1 No alias Histone H2A/H2B/H3 [Interproscan]. 0.04 OrthoFinder
Cz18g11080.t1 No alias Histone H2A/H2B/H3 [Interproscan]. 0.03 OrthoFinder
Dusal.0002s00025.1 33187952 Histone H2A/H2B/H3 [Interproscan]. 0.02 OrthoFinder
Dusal.0073s00028.1 33194595 Histone H2A/H2B/H3 [Interproscan]. 0.02 OrthoFinder
Dusal.0093s00026.1 33185350 Histone H2A/H2B/H3 [Interproscan]. 0.03 OrthoFinder
Dusal.0093s00033.1 33185318 Histone H2A/H2B/H3 [Interproscan]. 0.04 OrthoFinder
Dusal.0152s00002.1 33186216 Histone H2A/H2B/H3 [Interproscan]. 0.02 OrthoFinder
Dusal.0152s00018.1 33186215 Histone H2A/H2B/H3 [Interproscan]. 0.03 OrthoFinder
Dusal.0165s00022.1 33193361 Histone H2A/H2B/H3 [Interproscan]. 0.03 OrthoFinder
Dusal.0194s00024.1 33199901 Histone H2A/H2B/H3 [Interproscan]. 0.02 OrthoFinder
Dusal.0322s00002.1 33197807 Histone H2A/H2B/H3 [Interproscan]. 0.02 OrthoFinder
Dusal.0482s00002.1 33186429 Histone H2A/H2B/H3 [Interproscan]. 0.02 OrthoFinder
Dusal.0658s00002.1 33202429 Histone H2A/H2B/H3 [Interproscan]. 0.03 OrthoFinder
Dusal.0806s00005.1 33190346 Histone H2A/H2B/H3 [Interproscan]. 0.03 OrthoFinder
Dusal.1067s00005.1 33188990 Histone H2A/H2B/H3 [Interproscan]. 0.04 OrthoFinder
Dusal.1079s00002.1 33193518 Histone H2A/H2B/H3 [Interproscan]. 0.04 OrthoFinder
EOD22942 No alias Putative histone H3 [Ensembl]. 0.03 OrthoFinder
EOD31711 No alias Histone H2A/H2B/H3 [Interproscan]. 0.03 OrthoFinder
EOD33509 No alias Histone H2A/H2B/H3 [Interproscan]. 0.03 OrthoFinder
OT_01G03920.1 No alias Histone H2A/H2B/H3 [Interproscan]. 0.02 OrthoFinder
OT_11G02230.1 No alias Histone H2A/H2B/H3 [Interproscan]. 0.03 OrthoFinder
PTI_06G03830.1 No alias Histone H2A/H2B/H3 [Interproscan]. 0.02 OrthoFinder
PTI_06G03900.1 No alias Histone H2A/H2B/H3 [Interproscan]. 0.02 OrthoFinder
Sro2049_g312540.1 Contig754.g8570 Histone H3 0.02 OrthoFinder
Sro228_g092790.1 Contig1235.g11593 Histone H3 0.02 OrthoFinder
Sro2314_g322910.1 Contig3467.g26905 Histone H3 0.02 OrthoFinder
Sro932_g221580.1 Contig2857.g22901 Histone H3 0.02 OrthoFinder
TP03G01210.1 No alias Histone H2A/H2B/H3 [Interproscan]. 0.01 OrthoFinder
Vocar.0028s0101.1 32895667 Histone H2A/H2B/H3 [Interproscan]. 0.02 OrthoFinder
Vocar.0028s0150.1 32895676 Histone H2A/H2B/H3 [Interproscan]. 0.02 OrthoFinder
XM_002508962.1 MICPUN_86780, 86780 Histone H3 0.02 OrthoFinder
XM_003059175.1 MicpuC2_27286, 27286 Histone H2A/H2B/H3 [Interproscan]. 0.02 OrthoFinder
XM_003061662.1 MicpuC2_48264, 48264 Histone H2A/H2B/H3 [Interproscan]. 0.02 OrthoFinder
XM_003061708.1 MicpuC2_48289, 48289 Histone H3 0.02 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003997 acyl-CoA oxidase activity IEP Enrichment
MF GO:0004332 fructose-bisphosphate aldolase activity IEP Enrichment
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Enrichment
MF GO:0004748 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor IEP Enrichment
CC GO:0005777 peroxisome IEP Enrichment
BP GO:0005996 monosaccharide metabolic process IEP Enrichment
BP GO:0006006 glucose metabolic process IEP Enrichment
BP GO:0006082 organic acid metabolic process IEP Enrichment
BP GO:0006094 gluconeogenesis IEP Enrichment
BP GO:0006275 regulation of DNA replication IEP Enrichment
BP GO:0006631 fatty acid metabolic process IEP Enrichment
BP GO:0006635 fatty acid beta-oxidation IEP Enrichment
BP GO:0008156 negative regulation of DNA replication IEP Enrichment
BP GO:0009056 catabolic process IEP Enrichment
BP GO:0009062 fatty acid catabolic process IEP Enrichment
BP GO:0009890 negative regulation of biosynthetic process IEP Enrichment
BP GO:0009892 negative regulation of metabolic process IEP Enrichment
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP Enrichment
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Enrichment
BP GO:0016042 lipid catabolic process IEP Enrichment
BP GO:0016054 organic acid catabolic process IEP Enrichment
BP GO:0016485 protein processing IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
BP GO:0016540 protein autoprocessing IEP Enrichment
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Enrichment
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP Enrichment
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP Enrichment
MF GO:0016728 oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor IEP Enrichment
MF GO:0016829 lyase activity IEP Enrichment
MF GO:0016830 carbon-carbon lyase activity IEP Enrichment
MF GO:0016832 aldehyde-lyase activity IEP Enrichment
BP GO:0019318 hexose metabolic process IEP Enrichment
BP GO:0019319 hexose biosynthetic process IEP Enrichment
BP GO:0019395 fatty acid oxidation IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
BP GO:0030258 lipid modification IEP Enrichment
BP GO:0031324 negative regulation of cellular metabolic process IEP Enrichment
BP GO:0031327 negative regulation of cellular biosynthetic process IEP Enrichment
BP GO:0032787 monocarboxylic acid metabolic process IEP Enrichment
BP GO:0034440 lipid oxidation IEP Enrichment
CC GO:0042579 microbody IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
BP GO:0044242 cellular lipid catabolic process IEP Enrichment
BP GO:0044248 cellular catabolic process IEP Enrichment
BP GO:0044255 cellular lipid metabolic process IEP Enrichment
BP GO:0044281 small molecule metabolic process IEP Enrichment
BP GO:0044282 small molecule catabolic process IEP Enrichment
BP GO:0045005 DNA-dependent DNA replication maintenance of fidelity IEP Enrichment
BP GO:0046364 monosaccharide biosynthetic process IEP Enrichment
BP GO:0046395 carboxylic acid catabolic process IEP Enrichment
BP GO:0048478 replication fork protection IEP Enrichment
BP GO:0051604 protein maturation IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
MF GO:0061731 ribonucleoside-diphosphate reductase activity IEP Enrichment
BP GO:0072329 monocarboxylic acid catabolic process IEP Enrichment
BP GO:0090329 regulation of DNA-dependent DNA replication IEP Enrichment
BP GO:1901575 organic substance catabolic process IEP Enrichment
BP GO:2000104 negative regulation of DNA-dependent DNA replication IEP Enrichment
BP GO:2000113 negative regulation of cellular macromolecule biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 1 132
No external refs found!