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Aliases : KAA8497267
Description : 50S ribosomal protein L1
Gene families : OG_01_0000846 (OrthoFinder) Phylogenetic Tree(s): OG0000846_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: lcl|VRMN01000002.1_cds_KAA8497267.1_996 | |
| Cluster | HCCA: Cluster_88 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cz04g10270.t1 | No alias | Ribosomal protein L1/ribosomal biogenesis protein [Interproscan]. | 0.02 | OrthoFinder | |
| Sro353_g124480.1 | Contig1923.g16582 | Protein L1 | 0.02 | OrthoFinder | |
| XM_003058836.1 | MicpuC2_26898, 26898 | Ribosomal protein L1/ribosomal biogenesis protein [Interproscan]. | 0.02 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003856 | 3-dehydroquinate synthase activity | IEP | Enrichment |
| MF | GO:0003909 | DNA ligase activity | IEP | Enrichment |
| MF | GO:0003911 | DNA ligase (NAD+) activity | IEP | Enrichment |
| MF | GO:0004367 | glycerol-3-phosphate dehydrogenase [NAD+] activity | IEP | Enrichment |
| MF | GO:0004609 | phosphatidylserine decarboxylase activity | IEP | Enrichment |
| MF | GO:0005543 | phospholipid binding | IEP | Enrichment |
| BP | GO:0005975 | carbohydrate metabolic process | IEP | Enrichment |
| BP | GO:0006072 | glycerol-3-phosphate metabolic process | IEP | Enrichment |
| BP | GO:0006281 | DNA repair | IEP | Enrichment |
| BP | GO:0006325 | chromatin organization | IEP | Enrichment |
| BP | GO:0006354 | DNA-templated transcription, elongation | IEP | Enrichment |
| BP | GO:0006368 | transcription elongation from RNA polymerase II promoter | IEP | Enrichment |
| BP | GO:0006476 | protein deacetylation | IEP | Enrichment |
| BP | GO:0006950 | response to stress | IEP | Enrichment |
| BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | Enrichment |
| CC | GO:0008023 | transcription elongation factor complex | IEP | Enrichment |
| MF | GO:0008289 | lipid binding | IEP | Enrichment |
| BP | GO:0009058 | biosynthetic process | IEP | Enrichment |
| BP | GO:0016569 | covalent chromatin modification | IEP | Enrichment |
| BP | GO:0016570 | histone modification | IEP | Enrichment |
| BP | GO:0016575 | histone deacetylation | IEP | Enrichment |
| CC | GO:0016593 | Cdc73/Paf1 complex | IEP | Enrichment |
| MF | GO:0016838 | carbon-oxygen lyase activity, acting on phosphates | IEP | Enrichment |
| BP | GO:0019637 | organophosphate metabolic process | IEP | Enrichment |
| BP | GO:0033554 | cellular response to stress | IEP | Enrichment |
| BP | GO:0035601 | protein deacylation | IEP | Enrichment |
| BP | GO:0044249 | cellular biosynthetic process | IEP | Enrichment |
| BP | GO:0044262 | cellular carbohydrate metabolic process | IEP | Enrichment |
| BP | GO:0046168 | glycerol-3-phosphate catabolic process | IEP | Enrichment |
| BP | GO:0046434 | organophosphate catabolic process | IEP | Enrichment |
| MF | GO:0047952 | glycerol-3-phosphate dehydrogenase [NAD(P)+] activity | IEP | Enrichment |
| BP | GO:0050896 | response to stimulus | IEP | Enrichment |
| BP | GO:0051716 | cellular response to stimulus | IEP | Enrichment |
| BP | GO:0052646 | alditol phosphate metabolic process | IEP | Enrichment |
| BP | GO:0098732 | macromolecule deacylation | IEP | Enrichment |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR028364 | Ribosomal_L1/biogenesis | 199 | 390 |
| No external refs found! |