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  5. lcl|VRMN01000002.1_cds_KAA8497133.1_862

lcl|VRMN01000002.1_cds_KAA8497133.1_862 (KAA8497133)


Aliases : KAA8497133

Description : (6-4)DNA photolyase


Gene families : OG_01_0000085 (OrthoFinder) Phylogenetic Tree(s): OG0000085_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000002.1_cds_KAA8497133.1_862
Cluster HCCA: Cluster_44

Target Alias Description ECC score Gene Family Method Actions
Cre02.g078939 30785814 Cryptochrome DASH, chloroplastic/mitochondrial... 0.02 OrthoFinder
SymbC1.scaffold4194.2 4194.2 Cryptochrome/DNA photolyase, FAD-binding domain [Interproscan]. 0.02 OrthoFinder
SymbC1.scaffold7003.2 7003.2 Cryptochrome/DNA photolyase, FAD-binding domain [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000075 cell cycle checkpoint signaling IEP Enrichment
BP GO:0000077 DNA damage checkpoint signaling IEP Enrichment
MF GO:0003916 DNA topoisomerase activity IEP Enrichment
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP Enrichment
CC GO:0005779 integral component of peroxisomal membrane IEP Enrichment
BP GO:0006265 DNA topological change IEP Enrichment
BP GO:0006488 dolichol-linked oligosaccharide biosynthetic process IEP Enrichment
BP GO:0006490 oligosaccharide-lipid intermediate biosynthetic process IEP Enrichment
BP GO:0006534 cysteine metabolic process IEP Enrichment
BP GO:0006575 cellular modified amino acid metabolic process IEP Enrichment
BP GO:0006650 glycerophospholipid metabolic process IEP Enrichment
BP GO:0006658 phosphatidylserine metabolic process IEP Enrichment
BP GO:0006659 phosphatidylserine biosynthetic process IEP Enrichment
BP GO:0006813 potassium ion transport IEP Enrichment
BP GO:0006996 organelle organization IEP Enrichment
BP GO:0009069 serine family amino acid metabolic process IEP Enrichment
BP GO:0009092 homoserine metabolic process IEP Enrichment
BP GO:0010564 regulation of cell cycle process IEP Enrichment
BP GO:0010948 negative regulation of cell cycle process IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
BP GO:0016559 peroxisome fission IEP Enrichment
BP GO:0019346 transsulfuration IEP Enrichment
CC GO:0030896 checkpoint clamp complex IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
CC GO:0031231 intrinsic component of peroxisomal membrane IEP Enrichment
CC GO:0031300 intrinsic component of organelle membrane IEP Enrichment
CC GO:0031301 integral component of organelle membrane IEP Enrichment
BP GO:0031570 DNA integrity checkpoint signaling IEP Enrichment
BP GO:0042398 cellular modified amino acid biosynthetic process IEP Enrichment
BP GO:0042770 signal transduction in response to DNA damage IEP Enrichment
BP GO:0044255 cellular lipid metabolic process IEP Enrichment
BP GO:0045017 glycerolipid biosynthetic process IEP Enrichment
BP GO:0045786 negative regulation of cell cycle IEP Enrichment
BP GO:0046474 glycerophospholipid biosynthetic process IEP Enrichment
BP GO:0046486 glycerolipid metabolic process IEP Enrichment
MF GO:0046527 glucosyltransferase activity IEP Enrichment
BP GO:0048285 organelle fission IEP Enrichment
BP GO:0048523 negative regulation of cellular process IEP Enrichment
BP GO:0050667 homocysteine metabolic process IEP Enrichment
MF GO:0106073 dolichyl pyrophosphate Glc2Man9GlcNAc2 alpha-1,2-glucosyltransferase activity IEP Enrichment
BP GO:1901987 regulation of cell cycle phase transition IEP Enrichment
BP GO:1901988 negative regulation of cell cycle phase transition IEP Enrichment
InterPro domains Description Start Stop
IPR005101 Cryptochr/Photolyase_FAD-bd 305 503
IPR006050 DNA_photolyase_N 5 166
No external refs found!