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  5. lcl|VRMN01000002.1_cds_KAA8496763.1_492

lcl|VRMN01000002.1_cds_KAA8496763.1_492 (KAA8496763)


Aliases : KAA8496763

Description : 60S ribosomal protein L26


Gene families : OG_01_0003267 (OrthoFinder) Phylogenetic Tree(s): OG0003267_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000002.1_cds_KAA8496763.1_492
Cluster HCCA: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000144.60 tig00000144_g9051.t1 Protein biosynthesis.cytosolic ribosome.large subunit... 0.13 OrthoFinder
Cre01.g040000 30788495, RPL26 Protein biosynthesis.cytosolic ribosome.large subunit... 0.18 OrthoFinder
Cz06g24050.t1 No alias Ribosomal protein L26/L24, eukaryotic/archaeal [Interproscan]. 0.24 OrthoFinder
Dusal.0160s00007.1 33188333 Ribosomal protein L26/L24, eukaryotic/archaeal; KOW... 0.08 OrthoFinder
EOD37550 No alias Ribosomal protein L26/L24, eukaryotic/archaeal; KOW... 0.16 OrthoFinder
OT_12G00940.1 No alias Ribosomal protein L26/L24, eukaryotic/archaeal; KOW... 0.09 OrthoFinder
PTI_04G00150.1 No alias Ribosomal protein L26/L24, eukaryotic/archaeal; KOW... 0.19 OrthoFinder
Sro694_g188520.1 Contig4437.g33305 60S ribosomal protein L26 0.26 OrthoFinder
SymbC1.scaffold27.14 27.14 Ribosomal protein L26/L24, eukaryotic/archaeal; KOW... 0.02 OrthoFinder
SymbC1.scaffold27.16 27.16 KOW; Ribosomal protein L26/L24, eukaryotic/archaeal... 0.03 OrthoFinder
TP05G04810.1 No alias Ribosomal protein L26/L24, eukaryotic/archaeal; KOW... 0.23 OrthoFinder
XM_002503926.1 MICPUN_91267, 91267 KOW; Ribosomal protein L26/L24, eukaryotic/archaeal... 0.2 OrthoFinder
XM_003055465.1 MicpuC2_30848, 30848 Ribosomal protein L26/L24, eukaryotic/archaeal; KOW... 0.14 OrthoFinder
lcl|LHPG02000003.1_cds_PRW60014.1_6792 PRW60014 60S ribosomal L26-1 0.1 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
CC GO:0015934 large ribosomal subunit IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000213 tRNA-intron endonuclease activity IEP Enrichment
BP GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003743 translation initiation factor activity IEP Enrichment
MF GO:0003922 GMP synthase (glutamine-hydrolyzing) activity IEP Enrichment
MF GO:0004549 tRNA-specific ribonuclease activity IEP Enrichment
CC GO:0005840 ribosome IEP Enrichment
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Enrichment
BP GO:0006177 GMP biosynthetic process IEP Enrichment
BP GO:0006388 tRNA splicing, via endonucleolytic cleavage and ligation IEP Enrichment
BP GO:0006812 cation transport IEP Enrichment
BP GO:0006813 potassium ion transport IEP Enrichment
MF GO:0008135 translation factor activity, RNA binding IEP Enrichment
MF GO:0008324 cation transmembrane transporter activity IEP Enrichment
BP GO:0008380 RNA splicing IEP Enrichment
BP GO:0009123 nucleoside monophosphate metabolic process IEP Enrichment
BP GO:0009124 nucleoside monophosphate biosynthetic process IEP Enrichment
BP GO:0009126 purine nucleoside monophosphate metabolic process IEP Enrichment
BP GO:0009127 purine nucleoside monophosphate biosynthetic process IEP Enrichment
BP GO:0009156 ribonucleoside monophosphate biosynthetic process IEP Enrichment
BP GO:0009161 ribonucleoside monophosphate metabolic process IEP Enrichment
BP GO:0009167 purine ribonucleoside monophosphate metabolic process IEP Enrichment
BP GO:0009168 purine ribonucleoside monophosphate biosynthetic process IEP Enrichment
MF GO:0015078 proton transmembrane transporter activity IEP Enrichment
MF GO:0015291 secondary active transmembrane transporter activity IEP Enrichment
MF GO:0015297 antiporter activity IEP Enrichment
MF GO:0015298 solute:cation antiporter activity IEP Enrichment
MF GO:0015299 solute:proton antiporter activity IEP Enrichment
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Enrichment
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Enrichment
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Enrichment
MF GO:0022804 active transmembrane transporter activity IEP Enrichment
MF GO:0022853 active ion transmembrane transporter activity IEP Enrichment
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Enrichment
MF GO:0031369 translation initiation factor binding IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043228 non-membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Enrichment
MF GO:0045182 translation regulator activity IEP Enrichment
BP GO:0046037 GMP metabolic process IEP Enrichment
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
InterPro domains Description Start Stop
IPR005756 Ribosomal_L26/L24P_euk/arc 8 121
No external refs found!