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Aliases : KAA8496331
Description : 26S proteasome non-ATPase regulatory subunit 11
Gene families : OG_01_0002675 (OrthoFinder) Phylogenetic Tree(s): OG0002675_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: lcl|VRMN01000002.1_cds_KAA8496331.1_60 | |
| Cluster | HCCA: Cluster_65 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cpa|evm.model.tig00000615.78 | tig00000615_g2608.t1 | Protein degradation.26S proteasome.regulatory... | 0.05 | OrthoFinder | |
| Cre02.g097650 | 30784849, RPN6 | Protein degradation.26S proteasome.regulatory... | 0.07 | OrthoFinder | |
| Cz03g09110.t1 | No alias | Proteasome component (PCI) domain; 6S proteasome subunit... | 0.04 | OrthoFinder | |
| Dusal.0606s00002.1 | 33198918 | Proteasome component (PCI) domain; 26S proteasome... | 0.02 | OrthoFinder | |
| EOD27809 | No alias | 26S proteasome regulatory subunit Rpn6, N-terminal;... | 0.06 | OrthoFinder | |
| OT_02G03780.1 | No alias | Proteasome component (PCI) domain; 26S proteasome... | 0.03 | OrthoFinder | |
| PTI_13G00610.1 | No alias | 26S proteasome regulatory subunit Rpn6, N-terminal;... | 0.07 | OrthoFinder | |
| Sro413_g138100.1 | Contig3915.g30010 | ATPase regulatory subunit 11 | 0.11 | OrthoFinder | |
| TP04G07250.1 | No alias | Proteasome component (PCI) domain [Interproscan]. | 0.06 | OrthoFinder | |
| XM_003061156.1 | MicpuC2_19844, 19844 | 6S proteasome subunit Rpn6, C-terminal helix domain; 26S... | 0.06 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000123 | histone acetyltransferase complex | IEP | Enrichment |
| CC | GO:0000276 | mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) | IEP | Enrichment |
| MF | GO:0000339 | RNA cap binding | IEP | Enrichment |
| MF | GO:0000340 | RNA 7-methylguanosine cap binding | IEP | Enrichment |
| CC | GO:0000502 | proteasome complex | IEP | Enrichment |
| MF | GO:0003729 | mRNA binding | IEP | Enrichment |
| MF | GO:0004045 | aminoacyl-tRNA hydrolase activity | IEP | Enrichment |
| MF | GO:0004175 | endopeptidase activity | IEP | Enrichment |
| MF | GO:0004298 | threonine-type endopeptidase activity | IEP | Enrichment |
| CC | GO:0005575 | cellular_component | IEP | Enrichment |
| CC | GO:0005839 | proteasome core complex | IEP | Enrichment |
| BP | GO:0006325 | chromatin organization | IEP | Enrichment |
| BP | GO:0006354 | DNA-templated transcription, elongation | IEP | Enrichment |
| BP | GO:0006368 | transcription elongation from RNA polymerase II promoter | IEP | Enrichment |
| BP | GO:0006473 | protein acetylation | IEP | Enrichment |
| BP | GO:0006475 | internal protein amino acid acetylation | IEP | Enrichment |
| BP | GO:0006508 | proteolysis | IEP | Enrichment |
| BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEP | Enrichment |
| BP | GO:0006754 | ATP biosynthetic process | IEP | Enrichment |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | Enrichment |
| CC | GO:0008023 | transcription elongation factor complex | IEP | Enrichment |
| MF | GO:0008233 | peptidase activity | IEP | Enrichment |
| BP | GO:0009056 | catabolic process | IEP | Enrichment |
| BP | GO:0009057 | macromolecule catabolic process | IEP | Enrichment |
| BP | GO:0009142 | nucleoside triphosphate biosynthetic process | IEP | Enrichment |
| BP | GO:0009144 | purine nucleoside triphosphate metabolic process | IEP | Enrichment |
| BP | GO:0009145 | purine nucleoside triphosphate biosynthetic process | IEP | Enrichment |
| BP | GO:0009199 | ribonucleoside triphosphate metabolic process | IEP | Enrichment |
| BP | GO:0009201 | ribonucleoside triphosphate biosynthetic process | IEP | Enrichment |
| BP | GO:0009205 | purine ribonucleoside triphosphate metabolic process | IEP | Enrichment |
| BP | GO:0009206 | purine ribonucleoside triphosphate biosynthetic process | IEP | Enrichment |
| BP | GO:0009894 | regulation of catabolic process | IEP | Enrichment |
| BP | GO:0009966 | regulation of signal transduction | IEP | Enrichment |
| BP | GO:0010646 | regulation of cell communication | IEP | Enrichment |
| BP | GO:0015985 | energy coupled proton transport, down electrochemical gradient | IEP | Enrichment |
| BP | GO:0015986 | ATP synthesis coupled proton transport | IEP | Enrichment |
| BP | GO:0016569 | covalent chromatin modification | IEP | Enrichment |
| BP | GO:0016570 | histone modification | IEP | Enrichment |
| BP | GO:0016573 | histone acetylation | IEP | Enrichment |
| CC | GO:0016593 | Cdc73/Paf1 complex | IEP | Enrichment |
| MF | GO:0016787 | hydrolase activity | IEP | Enrichment |
| BP | GO:0018130 | heterocycle biosynthetic process | IEP | Enrichment |
| BP | GO:0018205 | peptidyl-lysine modification | IEP | Enrichment |
| BP | GO:0018393 | internal peptidyl-lysine acetylation | IEP | Enrichment |
| BP | GO:0018394 | peptidyl-lysine acetylation | IEP | Enrichment |
| BP | GO:0019438 | aromatic compound biosynthetic process | IEP | Enrichment |
| BP | GO:0019538 | protein metabolic process | IEP | Enrichment |
| CC | GO:0019773 | proteasome core complex, alpha-subunit complex | IEP | Enrichment |
| BP | GO:0019941 | modification-dependent protein catabolic process | IEP | Enrichment |
| BP | GO:0023051 | regulation of signaling | IEP | Enrichment |
| CC | GO:0030880 | RNA polymerase complex | IEP | Enrichment |
| CC | GO:0031248 | protein acetyltransferase complex | IEP | Enrichment |
| BP | GO:0032774 | RNA biosynthetic process | IEP | Enrichment |
| CC | GO:0032991 | protein-containing complex | IEP | Enrichment |
| CC | GO:0033177 | proton-transporting two-sector ATPase complex, proton-transporting domain | IEP | Enrichment |
| BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | Enrichment |
| BP | GO:0042176 | regulation of protein catabolic process | IEP | Enrichment |
| BP | GO:0043170 | macromolecule metabolic process | IEP | Enrichment |
| BP | GO:0043543 | protein acylation | IEP | Enrichment |
| BP | GO:0043632 | modification-dependent macromolecule catabolic process | IEP | Enrichment |
| BP | GO:0044238 | primary metabolic process | IEP | Enrichment |
| BP | GO:0044248 | cellular catabolic process | IEP | Enrichment |
| BP | GO:0044265 | cellular macromolecule catabolic process | IEP | Enrichment |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | Enrichment |
| CC | GO:0045263 | proton-transporting ATP synthase complex, coupling factor F(o) | IEP | Enrichment |
| BP | GO:0051603 | proteolysis involved in cellular protein catabolic process | IEP | Enrichment |
| CC | GO:0061695 | transferase complex, transferring phosphorus-containing groups | IEP | Enrichment |
| MF | GO:0070003 | threonine-type peptidase activity | IEP | Enrichment |
| MF | GO:0070403 | NAD+ binding | IEP | Enrichment |
| CC | GO:0098798 | mitochondrial protein-containing complex | IEP | Enrichment |
| CC | GO:0098800 | inner mitochondrial membrane protein complex | IEP | Enrichment |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | Enrichment |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | Enrichment |
| CC | GO:0140535 | intracellular protein-containing complex | IEP | Enrichment |
| BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | Enrichment |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | Enrichment |
| BP | GO:1901575 | organic substance catabolic process | IEP | Enrichment |
| CC | GO:1902493 | acetyltransferase complex | IEP | Enrichment |
| CC | GO:1902494 | catalytic complex | IEP | Enrichment |
| CC | GO:1905368 | peptidase complex | IEP | Enrichment |
| CC | GO:1905369 | endopeptidase complex | IEP | Enrichment |
| CC | GO:1990234 | transferase complex | IEP | Enrichment |
| No external refs found! |