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  5. lcl|VRMN01000001.1_cds_KAA8499989.1_8942

lcl|VRMN01000001.1_cds_KAA8499989.1_8942 (KAA8499989)


Aliases : KAA8499989

Description : Nucleoporin seh1-A


Gene families : OG_01_0000807 (OrthoFinder) Phylogenetic Tree(s): OG0000807_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000001.1_cds_KAA8499989.1_8942
Cluster HCCA: Cluster_88

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000939.9 tig00000939_g5487.t1 Vesicle trafficking.Coat protein II (COPII) coatomer... 0.02 OrthoFinder
Cre17.g715750 30782499, SEC13 Vesicle trafficking.Coat protein II (COPII) coatomer... 0.01 OrthoFinder
Sro909_g218970.1 Contig366.g4939 Nucleoporin SEH1 0.01 OrthoFinder
SymbC1.scaffold335.2 335.2 Hypothetical protein 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003747 translation release factor activity IEP Enrichment
MF GO:0003848 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity IEP Enrichment
MF GO:0003951 NAD+ kinase activity IEP Enrichment
MF GO:0004190 aspartic-type endopeptidase activity IEP Enrichment
MF GO:0004367 glycerol-3-phosphate dehydrogenase [NAD+] activity IEP Enrichment
MF GO:0004555 alpha,alpha-trehalase activity IEP Enrichment
MF GO:0004576 oligosaccharyl transferase activity IEP Enrichment
CC GO:0005801 cis-Golgi network IEP Enrichment
BP GO:0006072 glycerol-3-phosphate metabolic process IEP Enrichment
BP GO:0006415 translational termination IEP Enrichment
BP GO:0006741 NADP biosynthetic process IEP Enrichment
BP GO:0006760 folic acid-containing compound metabolic process IEP Enrichment
BP GO:0006886 intracellular protein transport IEP Enrichment
MF GO:0008079 translation termination factor activity IEP Enrichment
MF GO:0008135 translation factor activity, RNA binding IEP Enrichment
BP GO:0009143 nucleoside triphosphate catabolic process IEP Enrichment
BP GO:0009396 folic acid-containing compound biosynthetic process IEP Enrichment
MF GO:0015927 trehalase activity IEP Enrichment
MF GO:0016778 diphosphotransferase activity IEP Enrichment
BP GO:0017006 protein-tetrapyrrole linkage IEP Enrichment
BP GO:0017007 protein-bilin linkage IEP Enrichment
BP GO:0017009 protein-phycocyanobilin linkage IEP Enrichment
BP GO:0019359 nicotinamide nucleotide biosynthetic process IEP Enrichment
BP GO:0019362 pyridine nucleotide metabolic process IEP Enrichment
BP GO:0019363 pyridine nucleotide biosynthetic process IEP Enrichment
BP GO:0019637 organophosphate metabolic process IEP Enrichment
BP GO:0022411 cellular component disassembly IEP Enrichment
CC GO:0030126 COPI vesicle coat IEP Enrichment
BP GO:0032984 protein-containing complex disassembly IEP Enrichment
MF GO:0033218 amide binding IEP Enrichment
BP GO:0042398 cellular modified amino acid biosynthetic process IEP Enrichment
BP GO:0042558 pteridine-containing compound metabolic process IEP Enrichment
BP GO:0042559 pteridine-containing compound biosynthetic process IEP Enrichment
BP GO:0043624 cellular protein complex disassembly IEP Enrichment
BP GO:0043933 protein-containing complex subunit organization IEP Enrichment
MF GO:0045182 translation regulator activity IEP Enrichment
BP GO:0046168 glycerol-3-phosphate catabolic process IEP Enrichment
BP GO:0046434 organophosphate catabolic process IEP Enrichment
BP GO:0046496 nicotinamide nucleotide metabolic process IEP Enrichment
MF GO:0047429 nucleoside-triphosphate diphosphatase activity IEP Enrichment
MF GO:0047952 glycerol-3-phosphate dehydrogenase [NAD(P)+] activity IEP Enrichment
BP GO:0052646 alditol phosphate metabolic process IEP Enrichment
MF GO:0070001 aspartic-type peptidase activity IEP Enrichment
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Enrichment
MF GO:0120227 acyl-CoA binding IEP Enrichment
BP GO:1901136 carbohydrate derivative catabolic process IEP Enrichment
BP GO:1901292 nucleoside phosphate catabolic process IEP Enrichment
MF GO:1901567 fatty acid derivative binding IEP Enrichment
MF GO:1901681 sulfur compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR001680 WD40_repeat 41 82
IPR001680 WD40_repeat 3 31
No external refs found!