1. Home
  2. Species
  3. Porphyridium purpureum
  4. Sequence
  5. lcl|VRMN01000001.1_cds_KAA8499741.1_8694

lcl|VRMN01000001.1_cds_KAA8499741.1_8694 (KAA8499741)


Aliases : KAA8499741

Description : E3 ubiquitin-protein ligase


Gene families : OG_01_0000005 (OrthoFinder) Phylogenetic Tree(s): OG0000005_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000001.1_cds_KAA8499741.1_8694
Cluster HCCA: Cluster_81

Target Alias Description ECC score Gene Family Method Actions
Cz09g32110.t1 No alias Zinc finger, RING-type [Interproscan]. 0.02 OrthoFinder
Sro117_g057280.1 Contig3937.g30172 Protein ligase Arkadia 0.02 OrthoFinder
SymbC1.scaffold6896.1 6896.1 Zinc finger, RING-type [Interproscan]. 0.02 OrthoFinder
lcl|VRMN01000005.1_cds_KAA8494077.1_3941 KAA8494077 E3 ubiquitin-protein ligase RNF13 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003857 3-hydroxyacyl-CoA dehydrogenase activity IEP Enrichment
MF GO:0005215 transporter activity IEP Enrichment
MF GO:0005315 inorganic phosphate transmembrane transporter activity IEP Enrichment
BP GO:0006631 fatty acid metabolic process IEP Enrichment
BP GO:0006817 phosphate ion transport IEP Enrichment
MF GO:0008175 tRNA methyltransferase activity IEP Enrichment
MF GO:0008176 tRNA (guanine-N7-)-methyltransferase activity IEP Enrichment
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP Enrichment
MF GO:0022804 active transmembrane transporter activity IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
MF GO:0031419 cobalamin binding IEP Enrichment
InterPro domains Description Start Stop
IPR001841 Znf_RING 145 186
No external refs found!