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  5. lcl|VRMN01000001.1_cds_KAA8499587.1_8540

lcl|VRMN01000001.1_cds_KAA8499587.1_8540 (KAA8499587)


Aliases : KAA8499587

Description : DNA polymerase III subunit alpha


Gene families : OG_01_0001999 (OrthoFinder) Phylogenetic Tree(s): OG0001999_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000001.1_cds_KAA8499587.1_8540
Cluster HCCA: Cluster_87

Target Alias Description ECC score Gene Family Method Actions
SymbC1.scaffold21.233 21.233 OB-fold nucleic acid binding domain, AA-tRNA... 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
BP GO:0006260 DNA replication IEA Interproscan
MF GO:0008408 3'-5' exonuclease activity IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP Enrichment
MF GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity IEP Enrichment
MF GO:0004177 aminopeptidase activity IEP Enrichment
MF GO:0005543 phospholipid binding IEP Enrichment
BP GO:0006338 chromatin remodeling IEP Enrichment
BP GO:0006528 asparagine metabolic process IEP Enrichment
BP GO:0006529 asparagine biosynthetic process IEP Enrichment
BP GO:0006606 protein import into nucleus IEP Enrichment
BP GO:0006913 nucleocytoplasmic transport IEP Enrichment
MF GO:0008289 lipid binding IEP Enrichment
BP GO:0009966 regulation of signal transduction IEP Enrichment
BP GO:0010646 regulation of cell communication IEP Enrichment
BP GO:0015969 guanosine tetraphosphate metabolic process IEP Enrichment
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Enrichment
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Enrichment
BP GO:0017038 protein import IEP Enrichment
BP GO:0023051 regulation of signaling IEP Enrichment
MF GO:0030145 manganese ion binding IEP Enrichment
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP Enrichment
CC GO:0031464 Cul4A-RING E3 ubiquitin ligase complex IEP Enrichment
BP GO:0032012 regulation of ARF protein signal transduction IEP Enrichment
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Enrichment
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Enrichment
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Enrichment
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP Enrichment
BP GO:0034504 protein localization to nucleus IEP Enrichment
BP GO:0046578 regulation of Ras protein signal transduction IEP Enrichment
BP GO:0048583 regulation of response to stimulus IEP Enrichment
BP GO:0050789 regulation of biological process IEP Enrichment
BP GO:0050794 regulation of cellular process IEP Enrichment
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Enrichment
BP GO:0051169 nuclear transport IEP Enrichment
BP GO:0051170 import into nucleus IEP Enrichment
MF GO:0061608 nuclear import signal receptor activity IEP Enrichment
BP GO:0065007 biological regulation IEP Enrichment
CC GO:0080008 Cul4-RING E3 ubiquitin ligase complex IEP Enrichment
MF GO:0140104 molecular carrier activity IEP Enrichment
MF GO:0140142 nucleocytoplasmic carrier activity IEP Enrichment
MF GO:0140597 protein carrier activity IEP Enrichment
BP GO:1902531 regulation of intracellular signal transduction IEP Enrichment
InterPro domains Description Start Stop
IPR040982 DNA_pol3_finger 740 913
IPR029460 DNAPol_HHH 986 1087
IPR011708 DNA_pol3_alpha_NTPase_dom 478 737
IPR004013 PHP_dom 140 314
No external refs found!