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  5. lcl|VRMN01000001.1_cds_KAA8499501.1_8454

lcl|VRMN01000001.1_cds_KAA8499501.1_8454 (KAA8499501)


Aliases : KAA8499501

Description : Pre-mRNA-processing ATP-dependent RNA helicase PRP5


Gene families : OG_01_0001024 (OrthoFinder) Phylogenetic Tree(s): OG0001024_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000001.1_cds_KAA8499501.1_8454
Cluster HCCA: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
OT_01G05020.1 No alias Helicase, C-terminal; DEAD/DEAH box helicase domain... 0.02 OrthoFinder
PTI_02G06960.1 No alias Helicase, C-terminal; DEAD/DEAH box helicase domain... 0.02 OrthoFinder
Sro216_g089540.1 Contig227.g2731 RNA helicase DBP9 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004019 adenylosuccinate synthase activity IEP Enrichment
MF GO:0004379 glycylpeptide N-tetradecanoyltransferase activity IEP Enrichment
MF GO:0004540 ribonuclease activity IEP Enrichment
MF GO:0008168 methyltransferase activity IEP Enrichment
MF GO:0008171 O-methyltransferase activity IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
MF GO:0019107 myristoyltransferase activity IEP Enrichment
CC GO:0030117 membrane coat IEP Enrichment
CC GO:0031011 Ino80 complex IEP Enrichment
CC GO:0033202 DNA helicase complex IEP Enrichment
CC GO:0070603 SWI/SNF superfamily-type complex IEP Enrichment
CC GO:0097346 INO80-type complex IEP Enrichment
CC GO:1904949 ATPase complex IEP Enrichment
InterPro domains Description Start Stop
IPR011545 DEAD/DEAH_box_helicase_dom 154 358
IPR001650 Helicase_C 496 539
No external refs found!