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  5. lcl|VRMN01000001.1_cds_KAA8499172.1_8125

lcl|VRMN01000001.1_cds_KAA8499172.1_8125 (KAA8499172)


Aliases : KAA8499172

Description : Condensin complex subunit 3


Gene families : OG_01_0003764 (OrthoFinder) Phylogenetic Tree(s): OG0003764_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000001.1_cds_KAA8499172.1_8125
Cluster HCCA: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00022075.22 tig00022075_g23586.t1 No description available 0.07 OrthoFinder
Cre08.g362500 30773910 Cell cycle.mitosis and meiosis.chromatin... 0.05 OrthoFinder
Cz08g04190.t1 No alias Nuclear condensin complex subunit 3, C-terminal domain... 0.08 OrthoFinder
Cz08g04200.t1 No alias HEAT repeat [Interproscan]. 0.04 OrthoFinder
Dusal.0168s00010.1 33200876 Nuclear condensin complex subunit 3, C-terminal domain... 0.01 OrthoFinder
EOD10545 No alias Hypothetical protein [Ensembl]. 0.06 OrthoFinder
EOD31694 No alias Hypothetical protein [Ensembl]. 0.06 OrthoFinder
OT_15G02760.1 No alias Nuclear condensin complex subunit 3, C-terminal domain... 0.06 OrthoFinder
Transcript_contig_57525 57525 Nuclear condensin complex subunit 3, C-terminal domain... 0.03 OrthoFinder
Vocar.0021s0192.1 32895925 Hypothetical protein 0.04 OrthoFinder
XM_002504601.1 MICPUN_61425, 61425 Condensin complex component, non-smc subunit 0.03 OrthoFinder
XM_003063511.1 MicpuC2_42886, 42886 Condensin complex component, non-smc subunit 0.03 OrthoFinder
lcl|LHPG02000003.1_cds_PRW59671.1_6328 PRW59671 ARM repeat superfamily isoform 1 0.08 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
CC GO:0000776 kinetochore IEP Enrichment
MF GO:0003774 motor activity IEP Enrichment
MF GO:0003777 microtubule motor activity IEP Enrichment
MF GO:0003872 6-phosphofructokinase activity IEP Enrichment
MF GO:0003916 DNA topoisomerase activity IEP Enrichment
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP Enrichment
MF GO:0004672 protein kinase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005694 chromosome IEP Enrichment
BP GO:0006265 DNA topological change IEP Enrichment
BP GO:0006270 DNA replication initiation IEP Enrichment
BP GO:0006464 cellular protein modification process IEP Enrichment
BP GO:0006468 protein phosphorylation IEP Enrichment
BP GO:0006793 phosphorus metabolic process IEP Enrichment
BP GO:0006796 phosphate-containing compound metabolic process IEP Enrichment
BP GO:0006928 movement of cell or subcellular component IEP Enrichment
BP GO:0006996 organelle organization IEP Enrichment
BP GO:0007017 microtubule-based process IEP Enrichment
BP GO:0007018 microtubule-based movement IEP Enrichment
BP GO:0007059 chromosome segregation IEP Enrichment
MF GO:0008017 microtubule binding IEP Enrichment
MF GO:0008092 cytoskeletal protein binding IEP Enrichment
MF GO:0008094 ATPase, acting on DNA IEP Enrichment
MF GO:0008443 phosphofructokinase activity IEP Enrichment
BP GO:0008608 attachment of spindle microtubules to kinetochore IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
MF GO:0015631 tubulin binding IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
MF GO:0016301 kinase activity IEP Enrichment
BP GO:0016310 phosphorylation IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
CC GO:0018995 host cellular component IEP Enrichment
BP GO:0022402 cell cycle process IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
CC GO:0031262 Ndc80 complex IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
CC GO:0033643 host cell part IEP Enrichment
CC GO:0033646 host intracellular part IEP Enrichment
CC GO:0033647 host intracellular organelle IEP Enrichment
CC GO:0033648 host intracellular membrane-bounded organelle IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
BP GO:0036211 protein modification process IEP Enrichment
CC GO:0042025 host cell nucleus IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
CC GO:0043228 non-membrane-bounded organelle IEP Enrichment
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Enrichment
BP GO:0043412 macromolecule modification IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0051276 chromosome organization IEP Enrichment
BP GO:0051301 cell division IEP Enrichment
BP GO:0051315 attachment of mitotic spindle microtubules to kinetochore IEP Enrichment
BP GO:0071103 DNA conformation change IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
CC GO:0099080 supramolecular complex IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1903047 mitotic cell cycle process IEP Enrichment
InterPro domains Description Start Stop
IPR025977 Cnd3_C 459 776
No external refs found!