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  5. lcl|VRMN01000001.1_cds_KAA8498903.1_7856

lcl|VRMN01000001.1_cds_KAA8498903.1_7856 (KAA8498903)


Aliases : KAA8498903

Description : Splicing factor 3B subunit 3


Gene families : OG_01_0001952 (OrthoFinder) Phylogenetic Tree(s): OG0001952_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000001.1_cds_KAA8498903.1_7856
Cluster HCCA: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
Dusal.0114s00023.1 33202235 Mono-functional DNA-alkylating methyl methanesulfonate... 0.02 OrthoFinder
Sro105_g053150.1 Contig544.g7004 Spliceosome-associated protein 130 B 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000808 origin recognition complex IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0003830 beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity IEP Enrichment
MF GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity IEP Enrichment
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Enrichment
MF GO:0004559 alpha-mannosidase activity IEP Enrichment
MF GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEP Enrichment
MF GO:0004659 prenyltransferase activity IEP Enrichment
MF GO:0004788 thiamine diphosphokinase activity IEP Enrichment
MF GO:0005506 iron ion binding IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006399 tRNA metabolic process IEP Enrichment
BP GO:0006528 asparagine metabolic process IEP Enrichment
BP GO:0006529 asparagine biosynthetic process IEP Enrichment
BP GO:0008033 tRNA processing IEP Enrichment
MF GO:0008168 methyltransferase activity IEP Enrichment
MF GO:0008171 O-methyltransferase activity IEP Enrichment
MF GO:0008318 protein prenyltransferase activity IEP Enrichment
BP GO:0009229 thiamine diphosphate biosynthetic process IEP Enrichment
MF GO:0009975 cyclase activity IEP Enrichment
MF GO:0009976 tocopherol cyclase activity IEP Enrichment
MF GO:0015923 mannosidase activity IEP Enrichment
MF GO:0015924 mannosyl-oligosaccharide mannosidase activity IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
MF GO:0016757 glycosyltransferase activity IEP Enrichment
MF GO:0016778 diphosphotransferase activity IEP Enrichment
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP Enrichment
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Enrichment
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Enrichment
BP GO:0018342 protein prenylation IEP Enrichment
MF GO:0030975 thiamine binding IEP Enrichment
MF GO:0035596 methylthiotransferase activity IEP Enrichment
BP GO:0042357 thiamine diphosphate metabolic process IEP Enrichment
MF GO:0050497 alkylthioltransferase activity IEP Enrichment
MF GO:0050660 flavin adenine dinucleotide binding IEP Enrichment
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Enrichment
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Enrichment
BP GO:0097354 prenylation IEP Enrichment
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Enrichment

No InterPro domains available for this sequence

No external refs found!