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  5. Cpa|evm.model.tig00000042.236

Cpa|evm.model.tig00000042.236 (tig00000042_g15634.t1)


Aliases : tig00000042_g15634.t1

Description : Probable histidine kinase 3 OS=Oryza sativa subsp. indica


Gene families : OG_01_0000006 (OrthoFinder) Phylogenetic Tree(s): OG0000006_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000042.236
Cluster HCCA: Cluster_125

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000042.59 tig00000254_g22474.t1 Ethylene receptor 1 OS=Brassica oleracea 0.04 OrthoFinder
Cpa|evm.model.tig00000145.25 tig00000145_g8821.t1 Ethylene receptor 1 OS=Arabidopsis thaliana 0.07 OrthoFinder
Cpa|evm.model.tig00000190.40 tig00000190_g13861.t1 Ethylene receptor OS=Nicotiana tabacum 0.04 OrthoFinder
Cpa|evm.model.tig00000254.26 tig00000254_g22474.t1 Ethylene receptor 1 OS=Brassica oleracea 0.03 OrthoFinder
Cpa|evm.model.tig00000403.48 tig00000403_g305.t1 Ethylene response sensor 1 OS=Arabidopsis thaliana 0.03 OrthoFinder
Cpa|evm.model.tig00000605.24 tig00000605_g2490.t1 No description available 0.03 OrthoFinder
Cpa|evm.model.tig00000640.11 tig00000640_g2766.t1 Probable histidine kinase 4 OS=Oryza sativa subsp. japonica 0.06 OrthoFinder
Cpa|evm.model.tig00001249.15 tig00001249_g7788.t1 Histidine kinase 2 OS=Arabidopsis thaliana 0.03 OrthoFinder
Cpa|evm.model.tig00001487.17 tig00001487_g8947.t1 Probable histidine kinase 4 OS=Oryza sativa subsp. japonica 0.02 OrthoFinder
Cpa|evm.model.tig00020538.55 tig00020538_g10363.t1 Histidine kinase 4 OS=Arabidopsis thaliana 0.03 OrthoFinder
Cpa|evm.model.tig00020660.25 tig00021501_g21945.t1 Probable histidine kinase 3 OS=Oryza sativa subsp. indica 0.02 OrthoFinder
Cpa|evm.model.tig00020943.57 tig00020943_g16300.t1 Ethylene receptor OS=Malus domestica 0.06 OrthoFinder
Cpa|evm.model.tig00021137.20 tig00021137_g18985.t1 Ethylene receptor 1 OS=Arabidopsis thaliana 0.03 OrthoFinder
Cpa|evm.model.tig00021348.103 tig00021348_g20609.t1 Probable histidine kinase 4 OS=Oryza sativa subsp. japonica 0.03 OrthoFinder
Cpa|evm.model.tig00021682.12 tig00021682_g23102.t1 No description available 0.03 OrthoFinder
Cre07.g329900 30775034 Histidine kinase 5 OS=Arabidopsis thaliana 0.02 OrthoFinder
Cre11.g467678 30775629, COP6 Histidine kinase 5 OS=Arabidopsis thaliana 0.02 OrthoFinder
Cre16.g678900 30778058 No description available 0.02 OrthoFinder
Cre17.g733150 30781867 Histidine kinase 3 OS=Arabidopsis thaliana 0.02 OrthoFinder
Dusal.0212s00008.1 33202594 Signal transduction response regulator, receiver domain;... 0.02 OrthoFinder
Dusal.0319s00003.1 33201934 Archaeal/bacterial/fungal rhodopsins; Histidine... 0.02 OrthoFinder
Dusal.0675s00001.1 33202443 Histidine kinase/HSP90-like ATPase [Interproscan]. 0.02 OrthoFinder
Dusal.0675s00003.1 33202441 Archaeal/bacterial/fungal rhodopsins [Interproscan]. 0.04 OrthoFinder
Sro1466_g275080.1 Contig2211.g18351 Peroxide stress-activated histidine kinase mak2 0.01 OrthoFinder
Sro156_g070980.1 Contig473.g6436 Sensor protein kinase WalK (Fragment) 0.01 OrthoFinder
Sro164_g073700.1 Contig4339.g32744 Peroxide stress-activated histidine kinase mak2 0.01 OrthoFinder
Sro2374_g325320.1 Contig2298.g19021 Peroxide stress-activated histidine kinase mak2 0.01 OrthoFinder
Sro28_g018500.1 Contig404.g5459 Sensor protein kinase WalK (Fragment) 0.01 OrthoFinder
Sro33_g021480.1 Contig2613.g21169 Sensor kinase/phosphatase LuxQ 0.01 OrthoFinder
Sro508_g156640.1 Contig2824.g22619 Hybrid signal transduction histidine kinase K 0.01 OrthoFinder
Sro548_g164350.1 Contig1714.g15315 Sensor protein kinase WalK (Fragment) 0.01 OrthoFinder
SymbC1.scaffold733.8 733.8 PAS fold; Histidine kinase/HSP90-like ATPase; Signal... 0.02 OrthoFinder
TP22G01730.1 No alias Signal transduction response regulator, receiver domain... 0.02 OrthoFinder
Vocar.0001s0831.1 32884659 Archaeal/bacterial/fungal rhodopsins; Histidine... 0.02 OrthoFinder
Vocar.0069s0008.1 32896762 Histidine kinase/HSP90-like ATPase; Signal transduction... 0.02 OrthoFinder
XM_003062956.1 MicpuC2_21996, 21996 Signal transduction histidine kinase,... 0.02 OrthoFinder
lcl|BLLF01000478.1_cds_GFH12211.1_6688 HaLaN_07851, GFH12211 Signal transduction histidine kinase,... 0.03 OrthoFinder
lcl|BLLF01000561.1_cds_GFH12981.1_7458 HaLaN_08775, GFH12981 Signal transduction histidine kinase,... 0.02 OrthoFinder
lcl|BLLF01000625.1_cds_GFH13551.1_8028 HaLaN_09455, GFH13551 Signal transduction histidine kinase,... 0.02 OrthoFinder
lcl|BLLF01003144.1_cds_GFH26484.1_20961 HaLaN_24642, GFH26484 Signal transduction response regulator, receiver domain... 0.02 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP Enrichment
BP GO:0000271 polysaccharide biosynthetic process IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP Enrichment
MF GO:0004112 cyclic-nucleotide phosphodiesterase activity IEP Enrichment
MF GO:0004114 3',5'-cyclic-nucleotide phosphodiesterase activity IEP Enrichment
MF GO:0004312 fatty acid synthase activity IEP Enrichment
MF GO:0004318 enoyl-[acyl-carrier-protein] reductase (NADH) activity IEP Enrichment
MF GO:0005096 GTPase activator activity IEP Enrichment
MF GO:0005215 transporter activity IEP Enrichment
MF GO:0005216 ion channel activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
BP GO:0005975 carbohydrate metabolic process IEP Enrichment
BP GO:0005976 polysaccharide metabolic process IEP Enrichment
BP GO:0006073 cellular glucan metabolic process IEP Enrichment
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP Enrichment
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0006811 ion transport IEP Enrichment
MF GO:0008047 enzyme activator activity IEP Enrichment
MF GO:0008081 phosphoric diester hydrolase activity IEP Enrichment
MF GO:0008194 UDP-glycosyltransferase activity IEP Enrichment
MF GO:0008897 holo-[acyl-carrier-protein] synthase activity IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0009250 glucan biosynthetic process IEP Enrichment
MF GO:0015075 ion transmembrane transporter activity IEP Enrichment
MF GO:0015267 channel activity IEP Enrichment
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
BP GO:0016051 carbohydrate biosynthetic process IEP Enrichment
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP Enrichment
MF GO:0016757 glycosyltransferase activity IEP Enrichment
MF GO:0016758 hexosyltransferase activity IEP Enrichment
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Enrichment
MF GO:0022803 passive transmembrane transporter activity IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
MF GO:0030234 enzyme regulator activity IEP Enrichment
MF GO:0030695 GTPase regulator activity IEP Enrichment
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Enrichment
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
MF GO:0035251 UDP-glucosyltransferase activity IEP Enrichment
MF GO:0042578 phosphoric ester hydrolase activity IEP Enrichment
BP GO:0044042 glucan metabolic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044262 cellular carbohydrate metabolic process IEP Enrichment
BP GO:0044264 cellular polysaccharide metabolic process IEP Enrichment
MF GO:0046527 glucosyltransferase activity IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0051273 beta-glucan metabolic process IEP Enrichment
BP GO:0051274 beta-glucan biosynthetic process IEP Enrichment
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Enrichment
MF GO:0098772 molecular function regulator IEP Enrichment
CC GO:0098796 membrane protein complex IEP Enrichment
CC GO:0098797 plasma membrane protein complex IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
CC GO:1902494 catalytic complex IEP Enrichment
CC GO:1990234 transferase complex IEP Enrichment
InterPro domains Description Start Stop
IPR001789 Sig_transdc_resp-reg_receiver 1103 1177
IPR001789 Sig_transdc_resp-reg_receiver 1330 1454
IPR003594 HATPase_C 785 913
No external refs found!