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  5. lcl|VRMN01000001.1_cds_KAA8498820.1_7773

lcl|VRMN01000001.1_cds_KAA8498820.1_7773 (KAA8498820)


Aliases : KAA8498820

Description : 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase, chloroplastic


Gene families : OG_01_0002848 (OrthoFinder) Phylogenetic Tree(s): OG0002848_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000001.1_cds_KAA8498820.1_7773
Cluster HCCA: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
Cre16.g679669 30777907, CMS1 Secondary metabolism.terpenoids.methylerythritol... 0.04 OrthoFinder
Cz12g10090.t1 No alias Cytidylyltransferase IspD/TarI [Interproscan]. 0.02 OrthoFinder
EOD24324 No alias Cytidylyltransferase IspD/TarI [Interproscan]. 0.02 OrthoFinder
Sro2812_g337660.1 Contig1117.g10714 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 0.04 OrthoFinder
Sro3267_g346030.1 Contig693.g8110 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 0.02 OrthoFinder
Vocar.0058s0008.1 32890210 Cytidylyltransferase IspD/TarI [Interproscan]. 0.02 OrthoFinder
XM_002503575.1 MICPUN_83560, 83560 Cytidylyltransferase IspD/TarI [Interproscan]. 0.06 OrthoFinder
XM_003055479.1 MicpuC2_37930, 37930 Cytidylyltransferase IspD/TarI [Interproscan]. 0.03 OrthoFinder
lcl|LHPG02000008.1_cds_PRW56614.1_9442 PRW56614 2-C-methyl-D-erythritol 4-phosphate chloroplastic 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0070567 cytidylyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Enrichment
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Enrichment
MF GO:0004177 aminopeptidase activity IEP Enrichment
MF GO:0004332 fructose-bisphosphate aldolase activity IEP Enrichment
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP Enrichment
MF GO:0005509 calcium ion binding IEP Enrichment
BP GO:0006605 protein targeting IEP Enrichment
BP GO:0006612 protein targeting to membrane IEP Enrichment
BP GO:0006613 cotranslational protein targeting to membrane IEP Enrichment
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Enrichment
BP GO:0006778 porphyrin-containing compound metabolic process IEP Enrichment
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Enrichment
BP GO:0008104 protein localization IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
MF GO:0008171 O-methyltransferase activity IEP Enrichment
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Enrichment
CC GO:0009521 photosystem IEP Enrichment
CC GO:0009523 photosystem II IEP Enrichment
CC GO:0009654 photosystem II oxygen evolving complex IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
BP GO:0015979 photosynthesis IEP Enrichment
BP GO:0015994 chlorophyll metabolic process IEP Enrichment
BP GO:0015995 chlorophyll biosynthetic process IEP Enrichment
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Enrichment
MF GO:0016829 lyase activity IEP Enrichment
MF GO:0016830 carbon-carbon lyase activity IEP Enrichment
MF GO:0016831 carboxy-lyase activity IEP Enrichment
MF GO:0016832 aldehyde-lyase activity IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
MF GO:0016859 cis-trans isomerase activity IEP Enrichment
BP GO:0018208 peptidyl-proline modification IEP Enrichment
BP GO:0019725 cellular homeostasis IEP Enrichment
CC GO:0019898 extrinsic component of membrane IEP Enrichment
BP GO:0033013 tetrapyrrole metabolic process IEP Enrichment
BP GO:0033014 tetrapyrrole biosynthetic process IEP Enrichment
BP GO:0033036 macromolecule localization IEP Enrichment
BP GO:0033365 protein localization to organelle IEP Enrichment
BP GO:0034613 cellular protein localization IEP Enrichment
BP GO:0042440 pigment metabolic process IEP Enrichment
BP GO:0042592 homeostatic process IEP Enrichment
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Enrichment
BP GO:0045047 protein targeting to ER IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
BP GO:0045454 cell redox homeostasis IEP Enrichment
MF GO:0045735 nutrient reservoir activity IEP Enrichment
BP GO:0046148 pigment biosynthetic process IEP Enrichment
MF GO:0046406 magnesium protoporphyrin IX methyltransferase activity IEP Enrichment
BP GO:0051668 localization within membrane IEP Enrichment
BP GO:0065008 regulation of biological quality IEP Enrichment
BP GO:0070727 cellular macromolecule localization IEP Enrichment
BP GO:0070972 protein localization to endoplasmic reticulum IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
BP GO:0072594 establishment of protein localization to organelle IEP Enrichment
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Enrichment
BP GO:0072657 protein localization to membrane IEP Enrichment
BP GO:0090150 establishment of protein localization to membrane IEP Enrichment
CC GO:0098796 membrane protein complex IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
CC GO:1902494 catalytic complex IEP Enrichment
CC GO:1990204 oxidoreductase complex IEP Enrichment
InterPro domains Description Start Stop
IPR034683 IspD/TarI 92 311
No external refs found!