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  5. lcl|VRMN01000001.1_cds_KAA8498336.1_7289

lcl|VRMN01000001.1_cds_KAA8498336.1_7289 (KAA8498336)


Aliases : KAA8498336

Description : High affinity nitrate transporter 2.5


Gene families : OG_01_0000133 (OrthoFinder) Phylogenetic Tree(s): OG0000133_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000001.1_cds_KAA8498336.1_7289
Cluster HCCA: Cluster_96

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000571.4 tig00000571_g2155.t1 High-affinity nitrate transporter 2.3 OS=Oryza sativa... 0.02 OrthoFinder
Cpa|evm.model.tig00001177.11 tig00001177_g7366.t1 Nutrient uptake.nitrogen assimilation.nitrate uptake... 0.04 OrthoFinder
Cpa|evm.model.tig00001177.16 tig00001177_g7371.t1 Nutrient uptake.nitrogen assimilation.nitrate uptake... 0.03 OrthoFinder
Cre09.g396000 30781439, NRT2.3 Nutrient uptake.nitrogen assimilation.nitrate uptake... 0.02 OrthoFinder
Cre09.g410800 30780896, NRT2.2 Nutrient uptake.nitrogen assimilation.nitrate uptake... 0.03 OrthoFinder
Cre09.g410850 30780328 Nutrient uptake.nitrogen assimilation.nitrate uptake... 0.02 OrthoFinder
Cz08g30210.t1 No alias Hypothetical protein 0.08 OrthoFinder
Dusal.0123s00024.1 33188391 Hypothetical protein 0.05 OrthoFinder
Dusal.0153s00029.1 33203330 Hypothetical protein 0.03 OrthoFinder
Dusal.0605s00001.1 33202873 Major facilitator superfamily [Interproscan]. 0.03 OrthoFinder
Dusal.1231s00003.1 33193872 Major facilitator superfamily [Interproscan]. 0.01 OrthoFinder
EOD39011 No alias Putative nitrate transporter [Ensembl]. 0.02 OrthoFinder
OT_10G00930.1 No alias Major facilitator superfamily [Interproscan]. 0.06 OrthoFinder
PTI_04G01640.1 No alias Major facilitator superfamily [Interproscan]. 0.01 OrthoFinder
PTI_10G00040.1 No alias Major facilitator superfamily [Interproscan]. 0.01 OrthoFinder
PTI_25G00690.1 No alias Major facilitator superfamily [Interproscan]. 0.07 OrthoFinder
Sro121_g058950.1 Contig1619.g14649 Affinity nitrate transporter 2 0.02 OrthoFinder
Sro121_g058960.1 Contig1619.g14650 Affinity nitrate transporter 2 0.12 OrthoFinder
Sro1464_g274890.1 Contig485.g6548 Affinity nitrate transporter 2 0.07 OrthoFinder
Sro2046_g312490.1 Contig3582.g27685 Affinity nitrate transporter 2 0.01 OrthoFinder
TP03G03350.1 No alias Major facilitator superfamily [Interproscan]. 0.02 OrthoFinder
TP07G05080.1 No alias Major facilitator superfamily [Interproscan]. 0.02 OrthoFinder
Transcript_contig_80112 80112 Major facilitator superfamily [Interproscan]. 0.03 OrthoFinder
Transcript_contig_80192 80192 Hypothetical protein 0.03 OrthoFinder
XM_002507068.1 MICPUN_104706, 104706 Major facilitator superfamily 0.09 OrthoFinder
XM_002507463.1 MICPUN_113915, 113915 Major facilitator superfamily [Interproscan]. 0.08 OrthoFinder
XM_003057896.1 MicpuC2_49583, 49583 Major facilitator superfamily (NRT2.1) 0.08 OrthoFinder
lcl|LHPG02000020.1_cds_PRW21142.1_4871 PRW21142 High affinity nitrate transporter-like 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0022857 transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0019825 oxygen binding IEP Enrichment
MF GO:0020037 heme binding IEP Enrichment
MF GO:0030151 molybdenum ion binding IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
MF GO:0046906 tetrapyrrole binding IEP Enrichment
MF GO:0046914 transition metal ion binding IEP Enrichment
MF GO:0051536 iron-sulfur cluster binding IEP Enrichment
MF GO:0051540 metal cluster binding IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
InterPro domains Description Start Stop
IPR011701 MFS 80 445
No external refs found!