lcl|VRMN01000001.1_cds_KAA8498234.1_7187 (KAA8498234)

Aliases : KAA8498234

Description : Putative elongation factor TypA-like SVR3, chloroplastic

Gene families : OG_01_0000865 (OrthoFinder) Phylogenetic Tree(s): OG0000865_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: lcl|VRMN01000001.1_cds_KAA8498234.1_7187
Cluster HCCA: Cluster_63

Target Alias Description ECC score Gene Family Method Actions
Sro2131_g315890.1 Contig2224.g18465 Factor TypA-like SVR3, chloroplastic 0.01 OrthoFinder
Sro5_g004520.1 Contig4001.g30767 Factor TypA-like SVR3, chloroplastic 0.02 OrthoFinder
lcl|LHPG02000017.1_cds_PRW33152.1_3630 PRW33152 GTP-binding-like protein 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0006400 tRNA modification IEP Enrichment
BP GO:0008033 tRNA processing IEP Enrichment
MF GO:0008173 RNA methyltransferase activity IEP Enrichment
MF GO:0008175 tRNA methyltransferase activity IEP Enrichment
MF GO:0008176 tRNA (guanine-N7-)-methyltransferase activity IEP Enrichment
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Enrichment
BP GO:0009451 RNA modification IEP Enrichment
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP Enrichment
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
MF GO:0140101 catalytic activity, acting on a tRNA IEP Enrichment
InterPro domains Description Start Stop
IPR000640 EFG_V-like 468 552
IPR000795 T_Tr_GTP-bd_dom 77 265
IPR004161 EFTu-like_2 291 360
No external refs found!