1. Home
  2. Species
  3. Porphyridium purpureum
  4. Sequence
  5. lcl|VRMN01000001.1_cds_KAA8498206.1_7159

lcl|VRMN01000001.1_cds_KAA8498206.1_7159 (KAA8498206)


Aliases : KAA8498206

Description : Protein translocase subunit SecA


Gene families : OG_01_0001023 (OrthoFinder) Phylogenetic Tree(s): OG0001023_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000001.1_cds_KAA8498206.1_7159
Cluster HCCA: Cluster_63

Target Alias Description ECC score Gene Family Method Actions
Cre12.g517900 30792082, SCA1 Protein translocation.chloroplast.thylakoid membrane... 0.03 OrthoFinder
EOD36036 No alias SecA, preprotein cross-linking domain; SecA... 0.02 OrthoFinder
EOD38359 No alias SecA, preprotein cross-linking domain; SecA... 0.02 OrthoFinder
OT_01G04130.1 No alias SecA, preprotein cross-linking domain; SecA... 0.03 OrthoFinder
OT_04G03210.1 No alias SecA, preprotein cross-linking domain; SecA... 0.03 OrthoFinder
PTI_01G02660.1 No alias SecA, preprotein cross-linking domain; SecA DEAD-like,... 0.02 OrthoFinder
Sro611_g175330.1 Contig1882.g16414 Protein translocase subunit SecA 0.03 OrthoFinder
XM_002504916.1 MICPUN_103130, 103130 Type II secretory pathway family (SECA) 0.02 OrthoFinder
XM_003060606.1 MicpuC2_34584, 34584 Type II secretory pathway family protein 0.02 OrthoFinder
lcl|LHPG02000008.1_cds_PRW56539.1_9591 PRW56539 Translocase subunit chloroplastic isoform A 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0017038 protein import IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Enrichment
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0003989 acetyl-CoA carboxylase activity IEP Enrichment
MF GO:0004109 coproporphyrinogen oxidase activity IEP Enrichment
MF GO:0004332 fructose-bisphosphate aldolase activity IEP Enrichment
MF GO:0004470 malic enzyme activity IEP Enrichment
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP Enrichment
MF GO:0004751 ribose-5-phosphate isomerase activity IEP Enrichment
MF GO:0004779 sulfate adenylyltransferase activity IEP Enrichment
MF GO:0004781 sulfate adenylyltransferase (ATP) activity IEP Enrichment
MF GO:0004852 uroporphyrinogen-III synthase activity IEP Enrichment
BP GO:0006082 organic acid metabolic process IEP Enrichment
BP GO:0006091 generation of precursor metabolites and energy IEP Enrichment
BP GO:0006631 fatty acid metabolic process IEP Enrichment
BP GO:0006633 fatty acid biosynthetic process IEP Enrichment
BP GO:0006778 porphyrin-containing compound metabolic process IEP Enrichment
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Enrichment
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
CC GO:0009521 photosystem IEP Enrichment
CC GO:0009523 photosystem II IEP Enrichment
CC GO:0009654 photosystem II oxygen evolving complex IEP Enrichment
MF GO:0016421 CoA carboxylase activity IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016615 malate dehydrogenase activity IEP Enrichment
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Enrichment
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP Enrichment
MF GO:0016829 lyase activity IEP Enrichment
MF GO:0016832 aldehyde-lyase activity IEP Enrichment
MF GO:0016835 carbon-oxygen lyase activity IEP Enrichment
MF GO:0016836 hydro-lyase activity IEP Enrichment
MF GO:0016851 magnesium chelatase activity IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
MF GO:0016859 cis-trans isomerase activity IEP Enrichment
MF GO:0016860 intramolecular oxidoreductase activity IEP Enrichment
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Enrichment
MF GO:0016874 ligase activity IEP Enrichment
MF GO:0016885 ligase activity, forming carbon-carbon bonds IEP Enrichment
BP GO:0018130 heterocycle biosynthetic process IEP Enrichment
BP GO:0018208 peptidyl-proline modification IEP Enrichment
BP GO:0019438 aromatic compound biosynthetic process IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
CC GO:0019898 extrinsic component of membrane IEP Enrichment
BP GO:0032787 monocarboxylic acid metabolic process IEP Enrichment
BP GO:0033013 tetrapyrrole metabolic process IEP Enrichment
BP GO:0033014 tetrapyrrole biosynthetic process IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
BP GO:0045454 cell redox homeostasis IEP Enrichment
MF GO:0050661 NADP binding IEP Enrichment
MF GO:0051002 ligase activity, forming nitrogen-metal bonds IEP Enrichment
MF GO:0051003 ligase activity, forming nitrogen-metal bonds, forming coordination complexes IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
MF GO:0070402 NADPH binding IEP Enrichment
MF GO:0070566 adenylyltransferase activity IEP Enrichment
MF GO:0071949 FAD binding IEP Enrichment
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Enrichment
BP GO:1901135 carbohydrate derivative metabolic process IEP Enrichment
BP GO:1901362 organic cyclic compound biosynthetic process IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
CC GO:1990204 oxidoreductase complex IEP Enrichment
InterPro domains Description Start Stop
IPR011116 SecA_Wing/Scaffold 776 988
IPR011130 SecA_preprotein_X-link_dom 307 413
IPR011115 SecA_DEAD 79 456
No external refs found!