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  5. lcl|VRMN01000001.1_cds_KAA8497842.1_6795

lcl|VRMN01000001.1_cds_KAA8497842.1_6795 (KAA8497842)


Aliases : KAA8497842

Description : Prolycopene isomerase, chloroplastic


Gene families : OG_01_0000207 (OrthoFinder) Phylogenetic Tree(s): OG0000207_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000001.1_cds_KAA8497842.1_6795
Cluster HCCA: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
Cre09.g407200 30780595 Prolycopene isomerase, chloroplastic OS=Solanum lycopersicum 0.01 OrthoFinder
EOD16224 No alias Amine oxidase [Interproscan]. 0.02 OrthoFinder
PTI_01G08810.1 No alias NAD(P)-binding Rossmann-like domain [Interproscan]. 0.01 OrthoFinder
Sro1228_g254380.1 Contig2695.g21739 Prolycopene isomerase, chloroplastic 0.01 OrthoFinder
Sro774_g200580.1 Contig845.g9302 Prolycopene isomerase, chloroplastic 0.02 OrthoFinder
Vocar.0018s0001.1 32898723 Amine oxidase [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000808 origin recognition complex IEP Enrichment
MF GO:0003830 beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity IEP Enrichment
MF GO:0003877 ATP adenylyltransferase activity IEP Enrichment
MF GO:0003887 DNA-directed DNA polymerase activity IEP Enrichment
MF GO:0004197 cysteine-type endopeptidase activity IEP Enrichment
MF GO:0004402 histone acetyltransferase activity IEP Enrichment
MF GO:0004559 alpha-mannosidase activity IEP Enrichment
MF GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEP Enrichment
MF GO:0004665 prephenate dehydrogenase (NADP+) activity IEP Enrichment
MF GO:0005509 calcium ion binding IEP Enrichment
BP GO:0006260 DNA replication IEP Enrichment
BP GO:0006473 protein acetylation IEP Enrichment
BP GO:0006475 internal protein amino acid acetylation IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
BP GO:0006570 tyrosine metabolic process IEP Enrichment
BP GO:0006571 tyrosine biosynthetic process IEP Enrichment
MF GO:0008168 methyltransferase activity IEP Enrichment
MF GO:0008171 O-methyltransferase activity IEP Enrichment
MF GO:0008977 prephenate dehydrogenase (NAD+) activity IEP Enrichment
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP Enrichment
MF GO:0015923 mannosidase activity IEP Enrichment
MF GO:0015924 mannosyl-oligosaccharide mannosidase activity IEP Enrichment
BP GO:0016573 histone acetylation IEP Enrichment
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Enrichment
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
MF GO:0016757 glycosyltransferase activity IEP Enrichment
MF GO:0016758 hexosyltransferase activity IEP Enrichment
MF GO:0016779 nucleotidyltransferase activity IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
BP GO:0017006 protein-tetrapyrrole linkage IEP Enrichment
BP GO:0017007 protein-bilin linkage IEP Enrichment
BP GO:0017009 protein-phycocyanobilin linkage IEP Enrichment
BP GO:0018205 peptidyl-lysine modification IEP Enrichment
BP GO:0018393 internal peptidyl-lysine acetylation IEP Enrichment
BP GO:0018394 peptidyl-lysine acetylation IEP Enrichment
MF GO:0034212 peptide N-acetyltransferase activity IEP Enrichment
MF GO:0035596 methylthiotransferase activity IEP Enrichment
BP GO:0043543 protein acylation IEP Enrichment
MF GO:0050497 alkylthioltransferase activity IEP Enrichment
MF GO:0050660 flavin adenine dinucleotide binding IEP Enrichment
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Enrichment
MF GO:0070569 uridylyltransferase activity IEP Enrichment
BP GO:0071586 CAAX-box protein processing IEP Enrichment
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Enrichment
InterPro domains Description Start Stop
IPR002937 Amino_oxidase 61 463
No external refs found!