PTI_32G00280.1


Description : tRNA-dihydrouridine synthase [Interproscan].


Gene families : OG_01_0001084 (OrthoFinder) Phylogenetic Tree(s): OG0001084_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_32G00280.1
Cluster HCCA: Cluster_82

Target Alias Description ECC score Gene Family Method Actions
PTI_11G04370.1 No alias tRNA-dihydrouridine synthase [Interproscan]. 0.03 OrthoFinder
Sro1238_g255210.1 Contig4178.g31868 Dihydrouridine(20/20a) synthase 0.02 OrthoFinder
XM_002503422.1 MICPUN_59818, 59818 tRNA-dihydrouridine synthase [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0008033 tRNA processing IEA Interproscan
MF GO:0017150 tRNA dihydrouridine synthase activity IEA Interproscan
MF GO:0050660 flavin adenine dinucleotide binding IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Enrichment
BP GO:0000375 RNA splicing, via transesterification reactions IEP Enrichment
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Enrichment
BP GO:0000398 mRNA splicing, via spliceosome IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003684 damaged DNA binding IEP Enrichment
MF GO:0005543 phospholipid binding IEP Enrichment
CC GO:0005730 nucleolus IEP Enrichment
BP GO:0006099 tricarboxylic acid cycle IEP Enrichment
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0006281 DNA repair IEP Enrichment
BP GO:0006302 double-strand break repair IEP Enrichment
BP GO:0006303 double-strand break repair via nonhomologous end joining IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
BP GO:0006534 cysteine metabolic process IEP Enrichment
BP GO:0006950 response to stress IEP Enrichment
BP GO:0006974 cellular response to DNA damage stimulus IEP Enrichment
BP GO:0007275 multicellular organism development IEP Enrichment
MF GO:0008289 lipid binding IEP Enrichment
CC GO:0008303 caspase complex IEP Enrichment
BP GO:0009069 serine family amino acid metabolic process IEP Enrichment
BP GO:0009092 homoserine metabolic process IEP Enrichment
MF GO:0009975 cyclase activity IEP Enrichment
MF GO:0009976 tocopherol cyclase activity IEP Enrichment
CC GO:0016459 myosin complex IEP Enrichment
BP GO:0019346 transsulfuration IEP Enrichment
BP GO:0032501 multicellular organismal process IEP Enrichment
BP GO:0032502 developmental process IEP Enrichment
BP GO:0033554 cellular response to stress IEP Enrichment
MF GO:0035091 phosphatidylinositol binding IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
CC GO:0042765 GPI-anchor transamidase complex IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0048856 anatomical structure development IEP Enrichment
BP GO:0050667 homocysteine metabolic process IEP Enrichment
BP GO:0050896 response to stimulus IEP Enrichment
BP GO:0051716 cellular response to stimulus IEP Enrichment
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP Enrichment
CC GO:1905368 peptidase complex IEP Enrichment
CC GO:1905369 endopeptidase complex IEP Enrichment
InterPro domains Description Start Stop
IPR001269 DUS_fam 32 262
No external refs found!