1. Home
  2. Species
  3. Phaeodactylum tricornutum
  4. Sequence
  5. PTI_30G00280.1

PTI_30G00280.1


Description : Vacuolar protein sorting-associated protein 54, C-terminal [Interproscan].


Gene families : OG_01_0002044 (OrthoFinder) Phylogenetic Tree(s): OG0002044_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_30G00280.1
Cluster HCCA: Cluster_126

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000241.25 tig00000241_g20882.t1 No description available 0.03 OrthoFinder
Cre02.g087551 30786045 Vesicle trafficking.target membrane tethering.GARP/EARP... 0.02 OrthoFinder
Cz04g31220.t1 No alias Vacuolar protein sorting-associated protein 54,... 0.03 OrthoFinder
OT_06G01720.1 No alias Vacuolar protein sorting-associated protein 54,... 0.02 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0042147 retrograde transport, endosome to Golgi IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003777 microtubule motor activity IEP Enrichment
MF GO:0004576 oligosaccharyl transferase activity IEP Enrichment
MF GO:0005244 voltage-gated ion channel activity IEP Enrichment
MF GO:0005247 voltage-gated chloride channel activity IEP Enrichment
MF GO:0005253 anion channel activity IEP Enrichment
MF GO:0005254 chloride channel activity IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
MF GO:0005543 phospholipid binding IEP Enrichment
BP GO:0006464 cellular protein modification process IEP Enrichment
BP GO:0006486 protein glycosylation IEP Enrichment
BP GO:0006821 chloride transport IEP Enrichment
BP GO:0006928 movement of cell or subcellular component IEP Enrichment
BP GO:0007017 microtubule-based process IEP Enrichment
BP GO:0007018 microtubule-based movement IEP Enrichment
MF GO:0008017 microtubule binding IEP Enrichment
MF GO:0008289 lipid binding IEP Enrichment
MF GO:0008308 voltage-gated anion channel activity IEP Enrichment
BP GO:0009966 regulation of signal transduction IEP Enrichment
BP GO:0010646 regulation of cell communication IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
MF GO:0016757 glycosyltransferase activity IEP Enrichment
MF GO:0016758 hexosyltransferase activity IEP Enrichment
MF GO:0022832 voltage-gated channel activity IEP Enrichment
MF GO:0022836 gated channel activity IEP Enrichment
BP GO:0023051 regulation of signaling IEP Enrichment
CC GO:0030117 membrane coat IEP Enrichment
BP GO:0032012 regulation of ARF protein signal transduction IEP Enrichment
MF GO:0035091 phosphatidylinositol binding IEP Enrichment
BP GO:0036211 protein modification process IEP Enrichment
BP GO:0043413 macromolecule glycosylation IEP Enrichment
BP GO:0046578 regulation of Ras protein signal transduction IEP Enrichment
BP GO:0048583 regulation of response to stimulus IEP Enrichment
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Enrichment
BP GO:0070085 glycosylation IEP Enrichment
BP GO:1902531 regulation of intracellular signal transduction IEP Enrichment
InterPro domains Description Start Stop
IPR012501 Vps54_C 725 854
No external refs found!