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  5. PTI_28G01030.1

PTI_28G01030.1


Description : MCM domain; MCM, AAA-lid domain; MCM OB domain [Interproscan].


Gene families : OG_01_0000321 (OrthoFinder) Phylogenetic Tree(s): OG0000321_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_28G01030.1
Cluster HCCA: Cluster_104

Target Alias Description ECC score Gene Family Method Actions
XM_002507025.1 MICPUN_113427, 113427 Minichromosome maintenance Mcm7 (PRL) 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006270 DNA replication initiation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0003916 DNA topoisomerase activity IEP Enrichment
MF GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity IEP Enrichment
MF GO:0004518 nuclease activity IEP Enrichment
MF GO:0004672 protein kinase activity IEP Enrichment
MF GO:0004843 thiol-dependent deubiquitinase IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
CC GO:0005669 transcription factor TFIID complex IEP Enrichment
BP GO:0006265 DNA topological change IEP Enrichment
BP GO:0006281 DNA repair IEP Enrichment
BP GO:0006302 double-strand break repair IEP Enrichment
BP GO:0006464 cellular protein modification process IEP Enrichment
BP GO:0006468 protein phosphorylation IEP Enrichment
BP GO:0006528 asparagine metabolic process IEP Enrichment
BP GO:0006529 asparagine biosynthetic process IEP Enrichment
BP GO:0006950 response to stress IEP Enrichment
BP GO:0006974 cellular response to DNA damage stimulus IEP Enrichment
BP GO:0008033 tRNA processing IEP Enrichment
MF GO:0008242 omega peptidase activity IEP Enrichment
MF GO:0008270 zinc ion binding IEP Enrichment
BP GO:0009066 aspartate family amino acid metabolic process IEP Enrichment
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Enrichment
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Enrichment
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Enrichment
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Enrichment
MF GO:0017150 tRNA dihydrouridine synthase activity IEP Enrichment
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Enrichment
MF GO:0019899 enzyme binding IEP Enrichment
MF GO:0030145 manganese ion binding IEP Enrichment
MF GO:0031625 ubiquitin protein ligase binding IEP Enrichment
BP GO:0033554 cellular response to stress IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0036211 protein modification process IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
MF GO:0044389 ubiquitin-like protein ligase binding IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
MF GO:0046914 transition metal ion binding IEP Enrichment
MF GO:0050660 flavin adenine dinucleotide binding IEP Enrichment
BP GO:0050896 response to stimulus IEP Enrichment
BP GO:0051716 cellular response to stimulus IEP Enrichment
BP GO:0071103 DNA conformation change IEP Enrichment
CC GO:0090575 RNA polymerase II transcription regulator complex IEP Enrichment
MF GO:0101005 deubiquitinase activity IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
MF GO:0140101 catalytic activity, acting on a tRNA IEP Enrichment
InterPro domains Description Start Stop
IPR041562 MCM_lid 677 758
IPR001208 MCM_dom 476 651
IPR033762 MCM_OB 173 308
No external refs found!