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  5. PTI_27G01500.1

PTI_27G01500.1


Description : Midasin, AAA lid domain 7; Midasin AAA lid domain 5; ATPase, dynein-related, AAA domain [Interproscan].


Gene families : OG_01_0000696 (OrthoFinder) Phylogenetic Tree(s): OG0000696_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_27G01500.1
Cluster HCCA: Cluster_42

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000403.82 tig00000403_g342.t1 Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder
Cre03.g161800 30788217 Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder
Cz01g25050.t1 No alias Midasin, AAA lid domain 7; ATPase, dynein-related, AAA... 0.03 OrthoFinder
EOD04726 No alias Midasin AAA lid domain 5; ATPase, dynein-related, AAA... 0.03 OrthoFinder
EOD09279 No alias Midasin, AAA lid domain 7; Midasin AAA lid domain 5;... 0.06 OrthoFinder
OT_01G04150.1 No alias Midasin, AAA lid domain 7; ATPase, dynein-related, AAA... 0.06 OrthoFinder
Sro355_g125140.1 Contig2977.g23672 Nuclear chaperone required for maturation and nuclear... 0.05 OrthoFinder
Transcript_contig_78617 78617 Hypothetical protein 0.01 OrthoFinder
lcl|BLLF01000887.1_cds_GFH15700.1_10177 HaLaN_11977, GFH15700 Hypothetical protein 0.04 OrthoFinder
lcl|BLLF01004642.1_cds_GFH30001.1_24478 HaLaN_28767, GFH30001 VWFA domain-containing protein 0.07 OrthoFinder
lcl|LHPG02000014.1_cds_PRW39247.1_2461 PRW39247 Type A von Willebrand factor domain-containing 0.06 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003743 translation initiation factor activity IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0004386 helicase activity IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
BP GO:0006413 translational initiation IEP Enrichment
MF GO:0008094 ATPase, acting on DNA IEP Enrichment
MF GO:0008135 translation factor activity, RNA binding IEP Enrichment
MF GO:0008168 methyltransferase activity IEP Enrichment
MF GO:0008173 RNA methyltransferase activity IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
MF GO:0031369 translation initiation factor binding IEP Enrichment
BP GO:0032259 methylation IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0045182 translation regulator activity IEP Enrichment
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
InterPro domains Description Start Stop
IPR041190 Midasin_AAA_lid_5 981 1069
IPR040848 AAA_lid_7 2060 2160
IPR040848 AAA_lid_7 1294 1387
IPR011704 ATPase_dyneun-rel_AAA 1619 1711
IPR011704 ATPase_dyneun-rel_AAA 2353 2456
IPR011704 ATPase_dyneun-rel_AAA 860 947
IPR011704 ATPase_dyneun-rel_AAA 1447 1499
IPR011704 ATPase_dyneun-rel_AAA 716 774
IPR011704 ATPase_dyneun-rel_AAA 367 492
IPR011704 ATPase_dyneun-rel_AAA 1147 1282
IPR011704 ATPase_dyneun-rel_AAA 1904 2048
No external refs found!