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  5. PTI_27G00080.1

PTI_27G00080.1


Description : Reverse transcriptase, RNA-dependent DNA polymerase [Interproscan].


Gene families : OG_01_0000022 (OrthoFinder) Phylogenetic Tree(s): OG0000022_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_27G00080.1
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
PTI_00G00670.1 No alias Hypothetical protein 0.15 OrthoFinder
PTI_00G00790.1 No alias Hypothetical protein 0.07 OrthoFinder
PTI_00G00820.1 No alias Hypothetical protein 0.03 OrthoFinder
PTI_00G00830.1 No alias Hypothetical protein 0.07 OrthoFinder
PTI_00G01670.1 No alias Hypothetical protein 0.1 OrthoFinder
PTI_00G01930.1 No alias Hypothetical protein 0.13 OrthoFinder
PTI_00G03290.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.04 OrthoFinder
PTI_00G03740.1 No alias Hypothetical protein 0.12 OrthoFinder
PTI_00G03780.1 No alias Hypothetical protein 0.08 OrthoFinder
PTI_01G04550.1 No alias Hypothetical protein 0.03 OrthoFinder
PTI_01G05400.1 No alias Hypothetical protein 0.04 OrthoFinder
PTI_03G04530.1 No alias Hypothetical protein 0.15 OrthoFinder
PTI_03G04540.1 No alias Hypothetical protein 0.14 OrthoFinder
PTI_03G04560.1 No alias Hypothetical protein 0.09 OrthoFinder
PTI_04G00230.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.08 OrthoFinder
PTI_04G00240.1 No alias Hypothetical protein 0.09 OrthoFinder
PTI_04G05890.1 No alias Hypothetical protein 0.15 OrthoFinder
PTI_05G00050.1 No alias Hypothetical protein 0.06 OrthoFinder
PTI_05G04500.1 No alias Hypothetical protein 0.11 OrthoFinder
PTI_07G00160.1 No alias Hypothetical protein 0.1 OrthoFinder
PTI_07G01130.1 No alias Hypothetical protein 0.04 OrthoFinder
PTI_07G01850.1 No alias Hypothetical protein 0.09 OrthoFinder
PTI_07G04540.1 No alias Hypothetical protein 0.04 OrthoFinder
PTI_08G04530.1 No alias Hypothetical protein 0.07 OrthoFinder
PTI_08G04540.1 No alias Hypothetical protein 0.07 OrthoFinder
PTI_08G04560.1 No alias Hypothetical protein 0.12 OrthoFinder
PTI_08G04590.1 No alias Hypothetical protein 0.1 OrthoFinder
PTI_09G04600.1 No alias Hypothetical protein 0.14 OrthoFinder
PTI_11G00100.1 No alias Hypothetical protein 0.07 OrthoFinder
PTI_11G04480.1 No alias Hypothetical protein 0.07 OrthoFinder
PTI_11G04500.1 No alias Hypothetical protein 0.03 OrthoFinder
PTI_11G04530.1 No alias Hypothetical protein 0.06 OrthoFinder
PTI_13G00100.1 No alias Hypothetical protein 0.11 OrthoFinder
PTI_13G00110.1 No alias Hypothetical protein 0.07 OrthoFinder
PTI_13G00120.1 No alias Hypothetical protein 0.03 OrthoFinder
PTI_13G00130.1 No alias Hypothetical protein 0.15 OrthoFinder
PTI_13G02530.1 No alias Hypothetical protein 0.14 OrthoFinder
PTI_14G01300.1 No alias Hypothetical protein 0.13 OrthoFinder
PTI_14G02460.1 No alias Hypothetical protein 0.07 OrthoFinder
PTI_14G03550.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.15 OrthoFinder
PTI_16G00060.1 No alias Dehydrogenase, E1 component; Reverse transcriptase,... 0.14 OrthoFinder
PTI_16G00070.1 No alias Hypothetical protein 0.03 OrthoFinder
PTI_17G02990.1 No alias Hypothetical protein 0.15 OrthoFinder
PTI_18G00060.1 No alias Hypothetical protein 0.11 OrthoFinder
PTI_18G00120.1 No alias Hypothetical protein 0.14 OrthoFinder
PTI_18G00340.1 No alias Hypothetical protein 0.06 OrthoFinder
PTI_18G00350.1 No alias Hypothetical protein 0.03 OrthoFinder
PTI_19G01430.1 No alias Hypothetical protein 0.04 OrthoFinder
PTI_19G02870.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.04 OrthoFinder
PTI_19G03130.1 No alias Hypothetical protein 0.09 OrthoFinder
PTI_20G00020.1 No alias Hypothetical protein 0.08 OrthoFinder
PTI_21G02780.1 No alias Hypothetical protein 0.09 OrthoFinder
PTI_22G00420.1 No alias Hypothetical protein 0.04 OrthoFinder
PTI_22G00430.1 No alias Hypothetical protein 0.2 OrthoFinder
PTI_24G01110.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.1 OrthoFinder
PTI_25G00010.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.03 OrthoFinder
PTI_26G00010.1 No alias Hypothetical protein 0.08 OrthoFinder
PTI_26G00300.1 No alias Hypothetical protein 0.07 OrthoFinder
PTI_26G00310.1 No alias Hypothetical protein 0.13 OrthoFinder
PTI_26G01640.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.1 OrthoFinder
PTI_29G00120.1 No alias Hypothetical protein 0.03 OrthoFinder
PTI_29G01330.1 No alias 3'5'-cyclic nucleotide phosphodiesterase, catalytic... 0.03 OrthoFinder
PTI_29G01340.1 No alias Hypothetical protein 0.13 OrthoFinder
PTI_30G00100.1 No alias Hypothetical protein 0.09 OrthoFinder
PTI_31G00130.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.16 OrthoFinder
PTI_31G00140.1 No alias Hypothetical protein 0.06 OrthoFinder
PTI_31G00170.1 No alias Hypothetical protein 0.11 OrthoFinder
PTI_31G01010.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.05 OrthoFinder
PTI_33G00190.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.11 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006486 protein glycosylation IEP Enrichment
BP GO:0007165 signal transduction IEP Enrichment
BP GO:0015074 DNA integration IEP Enrichment
CC GO:0016459 myosin complex IEP Enrichment
CC GO:0042597 periplasmic space IEP Enrichment
BP GO:0043413 macromolecule glycosylation IEP Enrichment
InterPro domains Description Start Stop
IPR013103 RVT_2 1012 1214
No external refs found!