Heatmap: Cluster_11 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
4h after treatment
4h after treatment,No nitrate
8h after treatment
8h after treatment,No nitrate
20C
20h after treatment
20h after treatment,No nitrate
20h after treatment,Nocodazole added
36h after treatment
36h after treatment,No phosphate
Blue light,10min after light change
Blue light,60min after light change
Bohlin
CCAP1055/1,20C
CCAP1055/1,20C,High CO2,OligoDT primed
CCAP1055/1,20C,Low CO2,OligoDT primed
CCAP1055/1,20C,Normal CO2,OligoDT primed
CCMP2561
CCMP2561 Nitrase Reductase Knockout
CCMP632
CCMP632,24h
CCMP632,48h
CCMP632,72h
CCMP632,High light acclimated WT
CCMP632,Low light acclimated WT
NEPCC640,8h,1000ppmv CO2
NEPCC640,8h,390 ppmv CO2
No light,8h after treatment
Pt-1
Pt-1 8.6
Pt-1 8.6,With nitrogen
Pt-1 8.6,Without nitrogen
Red light,0min before light change
UTEX 646,Blue light
UTEX 646,No light
-0.48 -0.45 -0.8 -0.66 0.25 0.18 -0.22 -0.42 -0.15 -0.56 1.83 1.73 -3.28 0.1 -1.81 -2.26 -2.92 -1.05 -0.54 -3.24 -2.34 -0.98 -2.74 -2.46 -3.43 1.65 1.94 0.59 -0.22 -2.53 -2.94 -1.44 1.99 -0.81 0.25
-0.44 -0.1 -0.5 -0.92 0.69 -0.25 -0.83 -0.74 0.27 -1.0 2.57 2.8 -5.92 -2.4 - - - -5.17 -5.27 -3.46 -0.07 -0.82 -0.3 -0.72 -0.99 -1.65 -2.54 1.23 -3.26 -3.16 -2.7 - 2.6 -3.17 -0.58
- 0.55 - 0.56 0.92 - - - - - 2.05 3.04 - - - - - -3.6 -4.25 - - -0.81 - - - - - 0.46 -3.35 -2.6 - - 3.13 2.07 1.32
-1.58 -1.29 -1.79 -1.41 -1.1 -1.4 -0.77 -1.44 -1.08 -0.71 2.51 2.95 -3.66 0.71 -3.47 -3.87 -5.06 -2.0 -2.75 -1.22 -0.67 0.5 -0.81 -1.31 -3.11 -1.92 -2.25 -1.91 0.14 -2.41 -4.04 -2.25 2.75 0.63 -0.32
-1.62 0.76 -1.28 -0.48 2.7 -0.12 -2.41 0.87 -0.18 -0.56 1.74 2.11 -1.03 -2.44 - -2.18 - -2.79 -1.86 -1.99 -1.61 0.86 -2.06 -0.34 - -3.62 -1.79 0.38 -3.32 -0.29 - -0.62 2.16 -1.51 -1.3
-3.71 -3.98 - -2.35 2.92 -5.15 -2.51 -2.58 -4.06 -3.35 2.23 2.63 -5.0 -1.8 - -4.38 - -3.76 -4.4 0.44 -0.46 0.4 -4.14 -3.52 -4.19 - - -1.9 -1.24 0.63 -0.53 0.1 2.61 -0.99 -0.03
-2.55 -3.04 -0.83 -1.91 -0.49 -2.74 -3.6 -0.81 - -2.85 2.16 2.52 -4.01 1.89 -1.47 -0.79 - -0.04 -1.68 -1.35 -3.67 -2.02 -2.69 1.37 -3.41 -5.61 - -1.79 -0.06 -4.47 -5.41 -3.42 2.37 1.49 1.61
-4.94 -3.71 -5.96 -4.57 0.83 -5.13 -4.49 -5.78 -4.38 -5.09 2.93 2.55 -9.87 2.05 -6.9 -7.83 -8.51 -5.54 -6.59 -0.37 0.26 0.41 1.08 -2.77 -1.18 -1.95 -1.21 -2.46 -2.71 -0.49 -3.92 0.94 2.37 -2.95 -2.0
-4.94 -3.71 -5.96 -4.57 0.83 -5.13 -4.49 -5.78 -4.38 -5.09 2.93 2.55 -9.87 2.05 -6.9 -7.83 -8.51 -5.54 -6.59 -0.37 0.26 0.41 1.08 -2.77 -1.18 -1.95 -1.21 -2.46 -2.71 -0.49 -3.92 0.94 2.37 -2.95 -2.0
- - -0.59 -1.27 1.77 -15.45 - 0.87 - -1.28 1.93 2.19 - -0.45 - - - -1.83 -2.59 -1.81 1.46 -1.66 - -1.46 -1.59 1.08 2.6 0.28 -2.51 -0.94 - - 1.83 -1.92 -0.43
-0.15 1.49 0.02 0.29 1.2 -0.19 0.25 0.82 0.51 -1.17 1.73 1.92 - 1.27 - - - -2.77 -0.47 -0.93 0.06 0.37 -3.5 - -1.86 -3.84 -3.55 0.73 -3.47 -3.83 - - 1.61 -1.03 0.94
-2.29 -2.97 -2.21 -2.69 0.43 -2.88 -2.61 -2.83 -1.03 -0.08 2.37 2.57 1.09 1.86 -1.93 -2.56 -2.65 -0.86 -2.36 -0.67 -2.87 -0.82 -1.36 -1.55 -3.92 -1.42 -2.44 0.37 -1.04 -3.56 -3.96 -3.01 2.48 0.89 -0.54
1.35 0.42 0.88 -0.13 1.85 0.22 0.64 0.52 0.31 0.24 2.14 2.13 - -0.62 - - - -4.69 -3.57 -2.73 0.3 0.13 - -2.52 - -2.46 -1.45 -0.12 - -3.43 - - 2.15 - -
-2.04 -0.37 -1.92 -0.36 -0.47 -1.4 -0.22 -1.7 -1.06 -0.91 1.61 2.15 0.69 2.11 -1.6 -2.11 -3.7 -1.23 -0.19 -0.27 0.84 -0.02 1.49 -1.63 -0.29 -2.02 -3.87 -0.56 -0.32 -2.06 -2.64 -1.38 1.85 -3.64 -1.07
-0.37 0.35 -0.83 0.34 0.03 -0.58 0.77 -0.86 0.13 0.44 0.7 1.44 -1.4 0.08 -0.67 -1.22 -1.21 -0.09 -0.09 -0.22 0.49 1.25 1.78 -1.4 -0.6 -3.66 -3.92 0.83 -0.68 -0.63 -1.31 0.4 0.52 -3.34 -6.09
-3.4 -2.93 -1.32 -2.37 0.34 -1.68 -1.12 -1.81 -2.12 -0.98 1.19 1.85 -2.13 1.33 -1.4 -0.83 -0.82 0.34 -1.95 0.69 -2.9 -1.65 -2.65 2.64 -2.85 -0.63 -1.04 -3.92 2.29 -2.48 -3.02 -2.02 1.76 -1.91 -0.84
-1.0 -0.9 -1.05 -1.03 -1.15 -1.24 -1.52 -1.14 -1.39 -1.45 2.34 2.7 -2.53 2.61 -2.54 -2.07 -2.12 -0.95 -1.82 -0.77 -1.92 -0.78 -1.94 0.33 -5.09 -6.35 -4.15 -0.93 0.48 -3.92 -4.5 -3.71 2.47 -1.88 -1.56
0.02 0.38 -0.14 0.07 -1.03 -0.08 0.09 -0.63 -0.36 0.05 2.33 2.24 -1.23 0.82 -1.79 -2.22 -2.13 -0.87 -0.65 -1.89 -0.65 0.77 -1.47 -1.95 -4.95 -2.75 -3.49 -0.93 -2.25 -1.55 -1.36 -1.43 2.34 0.08 -1.09
-0.56 -0.15 -1.3 -1.2 -0.59 -0.09 0.01 -1.81 -0.77 -0.27 2.18 2.39 -2.4 0.85 -3.27 -4.55 -4.22 -1.86 -1.17 -1.35 0.27 0.51 -0.78 -2.03 - 0.22 0.0 -0.3 -3.07 -1.15 -1.88 -1.5 2.17 -0.89 1.32
-0.77 -0.27 -0.85 -0.61 -0.7 -0.8 -0.63 -1.2 -0.22 -0.41 2.22 2.26 -1.8 -1.4 -2.25 -1.98 -2.96 -1.69 -1.59 -0.97 0.13 1.27 -0.71 -0.36 -2.33 -1.5 -2.75 -0.05 -1.65 -0.62 -0.93 -1.19 2.12 1.12 0.67
-1.48 -1.0 -1.05 -1.76 0.76 -1.35 -0.84 -0.32 -0.71 0.03 2.63 2.87 -3.9 0.82 -1.17 -2.29 -3.86 -1.2 -1.36 -2.4 -0.48 -2.41 - -2.85 -2.49 - -0.96 -1.05 -1.48 -1.92 -2.02 -1.29 2.29 0.86 0.03
-1.69 -1.19 -1.96 -1.18 -1.85 -1.52 -0.87 -1.95 -1.4 -1.32 2.84 2.83 -2.26 2.27 -1.87 -1.57 -3.3 -1.02 -0.76 -1.97 -0.88 -0.55 -1.72 -1.7 -2.97 -3.56 -4.06 -0.46 -2.66 -1.79 -2.14 -1.42 2.42 -1.61 -1.22
-4.97 -3.49 -3.95 -4.67 -1.23 -5.48 -6.07 -4.7 -3.2 -3.95 2.2 2.55 -6.32 1.86 -1.91 -4.79 -1.97 0.41 -0.77 -1.26 -2.02 -1.75 -0.21 0.72 -4.24 -5.31 -3.05 - 1.41 -3.41 -4.35 -2.88 2.67 0.46 1.65
-0.12 0.11 -1.35 -0.24 0.19 -0.37 -0.02 -1.38 -0.22 -0.05 1.35 1.86 -5.3 0.52 -3.4 - -5.34 -2.18 -1.9 -1.42 1.65 1.03 0.76 -2.32 -5.56 -1.98 -3.61 -0.0 -2.91 -0.98 -3.08 0.03 1.78 0.8 1.41
- -0.77 - -0.74 0.14 - - -0.75 - - 3.44 3.24 - -0.42 - - - -3.29 -3.14 - 1.38 -0.51 -0.99 - - - - - - - - - 2.82 - -
-3.86 - -3.76 -2.53 -0.22 -2.75 -3.48 -0.95 - - 2.94 3.57 - -1.1 -2.28 - -3.64 -5.46 -7.38 -5.74 -2.85 0.67 -1.21 - - - -2.33 -3.71 -3.51 -2.66 - - 3.29 -2.41 -3.14
-1.14 -0.84 -0.2 0.66 1.33 -0.92 -0.97 0.63 -1.3 -1.05 1.68 1.73 -0.85 -0.26 -2.32 -1.92 -4.31 -0.54 -1.47 -0.45 0.6 0.66 1.68 -0.19 -0.04 -0.94 -3.0 -0.45 -0.85 -1.23 -0.37 -2.2 1.39 -2.16 0.04
-2.6 -2.55 -3.04 -2.54 -0.01 -2.71 -2.87 -3.99 -2.6 -2.22 2.0 2.01 -4.97 1.16 -1.46 -1.44 -2.43 -1.24 -0.95 0.22 0.06 0.28 1.41 -0.51 1.27 -4.5 -4.82 -0.79 -0.88 0.9 -1.15 1.98 1.48 -0.02 -3.82
-1.21 -0.62 -1.71 -0.95 0.16 -1.23 -0.92 -2.25 -0.74 -0.66 1.23 1.32 -1.9 0.6 -1.75 -1.25 -2.61 -0.04 -0.21 -0.23 0.67 0.41 2.12 -1.57 0.01 -2.06 -2.57 0.47 -0.04 0.45 -0.98 1.33 1.33 -0.08 -2.64
1.36 0.72 0.94 0.43 1.19 1.1 0.5 -0.29 0.47 0.61 1.46 1.46 -3.47 -3.57 -4.71 -2.91 -1.9 -2.74 -6.08 -2.34 0.93 1.3 -2.45 -3.03 -5.23 -1.15 0.9 0.26 -3.66 -2.34 -4.32 -3.76 1.31 -1.89 -3.57
-1.63 -1.5 -2.44 -2.95 -3.3 -2.48 -3.04 -0.2 -3.85 -3.44 2.75 2.95 - -0.75 -2.66 - -3.03 -5.27 -7.49 -4.79 1.05 1.42 -3.17 1.91 -2.63 -2.99 -3.31 - -6.95 -1.52 -1.57 -4.05 2.89 - -6.17
- - - -3.2 -1.9 - - -4.02 - - 3.89 3.48 - -2.36 - - - - - - - - - - - - - -3.38 - -1.49 - - 2.14 1.55 -0.74
- - - -6.62 -2.87 - - -5.13 -6.72 - 3.4 3.45 - 0.73 - - - -10.0 -10.59 -5.13 -3.62 -4.77 -5.25 -5.14 -4.58 - - -4.35 - -3.34 -3.35 -3.88 2.88 1.2 0.6
-2.21 -1.84 -2.19 -1.99 -4.49 -1.88 -1.77 -2.44 -1.78 -1.5 3.41 3.34 - -0.31 -8.05 -7.84 -8.84 -6.04 -7.03 -5.64 -9.05 -8.69 -7.28 -8.12 -10.57 -5.38 -4.46 -1.52 -8.17 -5.05 -5.64 -6.37 3.26 -0.64 -1.73
-0.84 -1.35 -1.63 -1.6 -0.45 -1.52 -1.14 -2.16 -1.19 -1.07 1.82 2.11 -1.55 1.63 -1.29 -2.02 -2.23 0.19 -0.54 -1.33 -0.08 0.76 1.67 -0.06 0.52 -1.89 -0.75 0.01 0.1 -1.16 -0.89 -0.91 1.65 -1.1 -4.4
- -1.81 -2.08 - -1.55 -2.47 -3.31 -3.37 - - 2.28 2.52 - -0.24 -1.51 -0.3 -3.46 -3.5 -4.95 -3.88 0.3 -0.29 - - - 2.21 3.16 - -0.98 - - - 2.1 -1.38 -2.95
0.21 0.15 -1.55 - 1.79 0.78 -1.41 -0.13 -1.02 - 2.2 2.32 - -0.01 - - - -2.72 -0.65 -2.85 0.64 - 0.54 - -1.77 -2.78 - - -3.5 -1.62 0.38 - 2.56 -0.81 1.21
-2.68 -2.46 -3.26 -2.52 1.1 -1.96 -1.05 -2.95 -0.87 -1.18 1.95 1.83 0.14 2.19 -2.78 -3.85 -4.93 -2.07 -2.26 0.26 -0.62 -0.92 1.65 -2.56 -0.35 -0.23 -1.54 1.35 -0.3 -2.12 -3.38 -1.0 2.13 -3.01 -1.93
- - - - 2.43 - 2.29 - - - 2.33 2.94 - 1.17 - - - -3.3 - - - - - - - - - - - - - - 3.27 - -
-4.12 - - -2.84 -0.47 -3.95 - -0.4 - 1.01 2.28 2.81 -1.6 2.39 -3.58 - - -1.87 -2.96 -0.17 -1.42 -1.13 -2.54 0.23 -0.3 -2.89 -0.22 - -1.75 -0.01 -0.32 -1.64 2.43 -2.5 -1.06
-0.78 -0.88 -0.99 -0.62 0.17 -0.65 -0.33 -1.15 -0.75 -0.61 1.66 2.13 0.21 2.29 -2.0 -1.97 -2.2 0.06 -0.13 -1.85 -3.9 -1.46 -3.1 -0.2 -2.24 -1.2 -0.06 -2.6 -0.31 -0.71 0.18 -0.94 1.9 0.24 -0.46
-3.74 -2.38 -2.73 -2.59 -1.22 -2.91 -2.46 -3.3 -2.09 -2.83 2.66 2.72 1.64 1.48 -2.13 -2.58 -1.83 -2.77 -2.32 -0.01 -2.22 -0.71 -2.08 -1.0 -2.65 -5.21 -3.93 -2.68 -1.69 -3.1 -3.37 -3.95 2.87 0.01 0.59
-3.09 -0.84 -3.03 -0.8 3.07 -1.4 -2.75 -0.24 -2.9 -2.8 1.71 2.4 0.56 -0.6 -2.54 - - -1.91 -2.62 -4.01 -0.25 -0.38 1.1 -1.86 -1.5 -2.46 - -0.59 -0.6 -1.12 - -0.11 2.25 -4.4 -2.91
-5.72 -4.87 -4.45 -5.41 -0.84 -4.02 -4.45 -3.79 -4.8 -6.0 3.0 3.48 -5.07 0.74 -4.56 -6.53 -6.1 -1.61 -3.09 -3.31 -2.48 -0.88 -2.17 -0.41 -2.31 -3.55 -2.4 -5.29 -3.3 -1.59 -3.09 -2.56 3.06 -0.67 -0.48
-3.86 -3.05 -4.39 -3.29 -1.29 -3.91 -2.48 -2.57 -2.51 -2.8 1.31 1.83 -0.57 2.57 -3.02 -2.95 -4.88 0.22 -0.23 -0.25 -1.94 -1.38 -1.15 0.72 -4.06 -7.74 -6.74 -2.75 1.65 -3.46 -5.97 -2.87 1.68 1.68 2.31
-1.12 -0.59 -1.38 -1.65 1.23 -0.54 -0.64 -0.49 -0.34 -0.3 1.02 1.25 -0.19 0.64 -1.81 -2.75 -4.76 -1.37 -1.3 1.25 -1.22 -0.13 1.87 -1.11 -0.89 0.25 0.08 1.48 0.23 -1.88 -1.26 -3.45 1.03 -1.25 0.31
-1.33 -1.25 -1.62 -1.32 0.87 -1.19 -1.24 -0.79 -0.98 -0.88 1.24 1.51 0.65 0.38 -2.14 -2.33 -3.43 -1.47 -1.24 0.4 0.04 0.75 2.09 -0.22 -0.33 -1.14 -0.72 1.11 0.04 -0.82 -0.36 -1.47 1.26 -0.98 -0.1
0.27 -0.31 -1.69 - 0.89 -1.24 0.45 -1.85 0.56 1.06 2.33 2.57 0.3 - - - - -4.5 -5.49 0.48 1.62 -0.91 - -2.44 -0.57 - - 1.88 -2.5 -1.95 - - 1.52 -3.9 -
-2.22 - - - -1.74 - - -1.88 - -1.89 3.03 3.02 - 2.24 - - - -3.08 -2.29 -2.51 -0.02 -0.95 - -2.08 - - 0.05 - -2.74 -2.16 -0.16 - 3.02 -2.5 -2.97
-4.03 - - - -0.03 -6.57 - - - - 3.33 3.79 - 0.79 - - - -5.8 -3.77 -5.43 -4.03 - - - - - - -1.74 -6.89 -4.86 -4.03 -3.72 2.91 -4.04 -2.98
-2.93 -2.23 -2.4 -2.71 1.39 -2.46 -2.15 - -2.58 -1.68 2.93 3.58 - -1.85 - - - -7.63 -6.4 -4.75 -2.42 - - - -4.35 - - -0.38 - -1.51 - -0.18 3.09 -5.22 -3.37
-3.75 -2.65 -2.72 -3.19 -0.97 -3.16 -2.34 -3.33 -3.57 -2.28 2.64 3.16 -1.67 1.83 -2.92 -2.97 -1.49 -1.23 -2.37 -2.49 -4.2 -2.11 -3.49 0.01 -6.09 -5.42 -4.84 -4.58 0.2 -1.92 -4.08 -2.85 2.96 0.2 -0.42
-1.59 -1.53 -2.57 -0.83 0.25 -1.04 -0.22 -2.73 -0.41 -0.23 2.68 2.88 -3.44 -2.28 -1.03 -3.82 -1.4 -1.82 0.16 -1.73 0.13 0.65 -0.5 -3.48 -3.55 -2.36 -2.34 -0.23 -1.48 -3.69 - -2.09 2.52 -0.97 -0.16
- - -6.24 -6.95 -4.92 - - - - -6.95 3.53 3.68 - -3.36 - - - -10.15 -9.39 - -6.85 - - -7.01 - - - - -9.9 -8.37 - - 3.37 -5.57 -3.15
-1.07 -0.99 -0.87 -0.8 -1.88 -0.96 -0.8 -1.19 -0.75 -0.78 3.02 3.09 -2.32 -1.77 -5.57 -6.83 -6.53 -2.72 -2.07 -5.03 -4.11 -4.63 -4.11 -5.51 -7.69 -3.48 -0.02 -0.62 -6.75 0.61 -3.12 -0.38 2.94 -2.11 -2.75
-0.68 -2.16 -2.99 -1.2 2.28 -3.82 -1.72 1.41 -2.41 -0.58 2.06 2.21 -5.38 -1.0 -5.83 -2.9 - -3.25 -1.69 -2.74 -1.89 0.06 -1.27 -2.59 -4.23 -1.74 1.35 -1.96 -5.16 -0.25 -2.76 -0.79 2.22 0.86 0.77
-3.45 -2.22 -3.82 -3.06 -0.59 -3.07 -2.58 -2.31 -3.51 -3.81 3.14 2.44 -5.57 -0.52 -3.83 -4.35 -7.37 0.4 -1.42 -2.93 0.18 -0.2 -0.85 -0.26 0.19 -2.78 -2.25 -2.36 -0.79 0.14 -1.18 1.52 2.58 -4.25 -3.21
-0.84 -0.24 -0.96 -0.37 0.76 0.14 -0.06 -0.53 -0.03 0.52 1.4 1.75 -2.67 0.3 -1.1 -1.64 -2.38 -0.12 -0.95 0.22 -0.04 0.35 0.93 -0.67 -2.07 -1.69 -1.8 0.05 -0.26 -1.49 -1.16 -2.06 1.5 -1.79 1.49
-1.21 -0.34 -1.34 -0.78 -0.65 -1.29 -0.8 -1.36 -1.12 -0.7 2.12 2.66 1.54 0.79 -1.38 -1.54 -1.24 -0.95 -0.72 -0.25 -0.74 0.12 -0.35 -1.73 -4.14 -1.51 -2.26 -0.91 -0.13 -2.15 -2.58 -1.39 2.09 -0.35 -0.65
-0.3 -0.21 -0.61 -0.19 -0.68 0.07 0.22 -0.93 0.33 0.27 2.35 2.38 -0.75 -0.47 -2.58 -1.84 -4.37 -1.22 -1.34 -1.88 -0.91 -0.19 -0.67 -2.0 -2.63 0.21 0.46 -0.72 -1.19 -1.58 -2.11 -1.86 2.19 -1.17 -0.17
0.78 0.96 0.78 0.43 0.54 0.92 0.12 0.86 0.8 0.59 1.41 1.66 -1.36 0.45 -1.56 -2.92 -1.94 -1.75 -1.98 -1.81 -0.27 0.9 -1.04 -1.42 -3.33 -2.18 -2.48 0.33 -2.63 -1.85 -2.44 -2.46 1.53 -2.33 -1.32
-0.01 0.23 0.41 0.39 -0.47 0.4 0.52 1.15 -0.06 0.13 1.73 2.01 -2.85 -0.4 -1.81 -1.9 -3.6 -0.9 -1.15 -0.2 -0.18 0.38 -0.68 -0.32 -5.11 -2.27 -2.8 -0.34 -1.5 0.14 -0.47 -1.39 1.96 -2.05 -2.13
-8.9 -9.02 -8.12 -9.16 -0.95 -8.51 -7.8 -8.41 -6.62 -4.08 3.27 3.54 -11.15 1.15 -7.48 -11.55 -7.82 -5.19 -8.09 -2.53 -3.52 -4.48 -0.45 -5.82 -8.32 - - -5.73 -4.15 -8.36 -9.48 -7.67 3.28 -5.54 -5.67
-3.74 -4.05 -4.3 -5.01 -1.77 -4.17 -1.75 -1.32 -4.13 -4.01 2.52 2.93 -1.1 2.12 -1.58 -2.92 -2.53 -1.34 -1.67 -1.09 -3.14 -1.75 - -0.06 -2.11 -0.33 0.23 -5.1 -1.63 -0.11 0.79 -1.57 2.63 -2.09 -1.79
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Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.