1. Home
  2. Species
  3. Phaeodactylum tricornutum
  4. Sequence
  5. PTI_26G01000.1

PTI_26G01000.1


Description : Proteasome, subunit alpha/beta; Proteasome alpha-subunit, N-terminal domain [Interproscan].


Gene families : OG_01_0003856 (OrthoFinder) Phylogenetic Tree(s): OG0003856_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_26G01000.1
Cluster HCCA: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001466.9 tig00001466_g8787.t1 Protein degradation.26S proteasome.20S core... 0.01 OrthoFinder
Cre14.g619550 30776161, POA7 Protein degradation.26S proteasome.20S core... 0.23 OrthoFinder
Cz03g23070.t1 No alias Proteasome, subunit alpha/beta [Interproscan]. 0.06 OrthoFinder
Dusal.0179s00015.1 33190115 Proteasome, subunit alpha/beta; Proteasome... 0.03 OrthoFinder
EOD22067 No alias Proteasome, subunit alpha/beta; Proteasome... 0.13 OrthoFinder
OT_10G03110.1 No alias Proteasome alpha-subunit, N-terminal domain; Proteasome,... 0.04 OrthoFinder
Sro1315_g262060.1 Contig2837.g22770 Proteasome subunit alpha type-3 (Fragment) 0.32 OrthoFinder
TP01G11230.1 No alias Proteasome, subunit alpha/beta; Proteasome... 0.26 OrthoFinder
Transcript_contig_56160 56160 Proteasome alpha-subunit, N-terminal domain; Proteasome,... 0.02 OrthoFinder
Vocar.0026s0116.1 32892464 Proteasome alpha-subunit, N-terminal domain; Proteasome,... 0.04 OrthoFinder
XM_002503515.1 MICPUN_108591, 108591 Proteasome, subunit alpha/beta; Proteasome... 0.02 OrthoFinder
XM_003055523.1 MicpuC2_50364, 50364 Proteasome, subunit alpha/beta; Proteasome... 0.07 OrthoFinder
lcl|LHPG02000004.1_cds_PRW59304.1_7323 PRW59304 20S proteasome alpha subunit G 0.07 OrthoFinder
lcl|VRMN01000003.1_cds_KAA8496150.1_2148 KAA8496150 Proteasome subunit alpha type-3 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEA Interproscan
MF GO:0004298 threonine-type endopeptidase activity IEA Interproscan
CC GO:0005839 proteasome core complex IEA Interproscan
BP GO:0006511 ubiquitin-dependent protein catabolic process IEA Interproscan
CC GO:0019773 proteasome core complex, alpha-subunit complex IEA Interproscan
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP Enrichment
MF GO:0000166 nucleotide binding IEP Enrichment
CC GO:0000502 proteasome complex IEP Enrichment
MF GO:0004176 ATP-dependent peptidase activity IEP Enrichment
MF GO:0004559 alpha-mannosidase activity IEP Enrichment
MF GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
BP GO:0006289 nucleotide-excision repair IEP Enrichment
CC GO:0008537 proteasome activator complex IEP Enrichment
BP GO:0009894 regulation of catabolic process IEP Enrichment
MF GO:0010181 FMN binding IEP Enrichment
BP GO:0010498 proteasomal protein catabolic process IEP Enrichment
MF GO:0015399 primary active transmembrane transporter activity IEP Enrichment
MF GO:0015923 mannosidase activity IEP Enrichment
MF GO:0015924 mannosyl-oligosaccharide mannosidase activity IEP Enrichment
BP GO:0016567 protein ubiquitination IEP Enrichment
BP GO:0016579 protein deubiquitination IEP Enrichment
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
BP GO:0030163 protein catabolic process IEP Enrichment
MF GO:0030234 enzyme regulator activity IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0031072 heat shock protein binding IEP Enrichment
BP GO:0032446 protein modification by small protein conjugation IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0034450 ubiquitin-ubiquitin ligase activity IEP Enrichment
MF GO:0035091 phosphatidylinositol binding IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
BP GO:0042176 regulation of protein catabolic process IEP Enrichment
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP Enrichment
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0043248 proteasome assembly IEP Enrichment
BP GO:0045048 protein insertion into ER membrane IEP Enrichment
BP GO:0051205 protein insertion into membrane IEP Enrichment
BP GO:0051246 regulation of protein metabolic process IEP Enrichment
BP GO:0051668 localization within membrane IEP Enrichment
MF GO:0061630 ubiquitin protein ligase activity IEP Enrichment
MF GO:0061659 ubiquitin-like protein ligase activity IEP Enrichment
BP GO:0070646 protein modification by small protein removal IEP Enrichment
BP GO:0070647 protein modification by small protein conjugation or removal IEP Enrichment
BP GO:0072657 protein localization to membrane IEP Enrichment
BP GO:0090150 establishment of protein localization to membrane IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:0098772 molecular function regulator IEP Enrichment
CC GO:0140535 intracellular protein-containing complex IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
CC GO:1902494 catalytic complex IEP Enrichment
CC GO:1905369 endopeptidase complex IEP Enrichment
InterPro domains Description Start Stop
IPR000426 Proteasome_asu_N 8 30
IPR001353 Proteasome_sua/b 31 221
No external refs found!