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Description : Reverse transcriptase, RNA-dependent DNA polymerase [Interproscan].
Gene families : OG_01_0000022 (OrthoFinder) Phylogenetic Tree(s): OG0000022_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: PTI_26G00320.1 | |
| Cluster | HCCA: Cluster_11 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| PTI_00G00670.1 | No alias | Hypothetical protein | 0.02 | OrthoFinder | |
| PTI_00G00850.1 | No alias | Hypothetical protein | 0.03 | OrthoFinder | |
| PTI_00G01670.1 | No alias | Hypothetical protein | 0.03 | OrthoFinder | |
| PTI_00G01860.1 | No alias | Hypothetical protein | 0.03 | OrthoFinder | |
| PTI_00G01930.1 | No alias | Hypothetical protein | 0.02 | OrthoFinder | |
| PTI_00G02260.1 | No alias | Reverse transcriptase, RNA-dependent DNA polymerase... | 0.03 | OrthoFinder | |
| PTI_00G03290.1 | No alias | Reverse transcriptase, RNA-dependent DNA polymerase... | 0.03 | OrthoFinder | |
| PTI_00G03300.1 | No alias | Hypothetical protein | 0.03 | OrthoFinder | |
| PTI_00G03380.1 | No alias | Hypothetical protein | 0.01 | OrthoFinder | |
| PTI_00G03740.1 | No alias | Hypothetical protein | 0.02 | OrthoFinder | |
| PTI_00G03760.1 | No alias | Hypothetical protein | 0.03 | OrthoFinder | |
| PTI_00G03790.1 | No alias | Hypothetical protein | 0.04 | OrthoFinder | |
| PTI_01G04550.1 | No alias | Hypothetical protein | 0.01 | OrthoFinder | |
| PTI_01G05400.1 | No alias | Hypothetical protein | 0.01 | OrthoFinder | |
| PTI_02G00010.1 | No alias | Hypothetical protein | 0.04 | OrthoFinder | |
| PTI_03G04530.1 | No alias | Hypothetical protein | 0.02 | OrthoFinder | |
| PTI_04G00230.1 | No alias | Reverse transcriptase, RNA-dependent DNA polymerase... | 0.02 | OrthoFinder | |
| PTI_04G05890.1 | No alias | Hypothetical protein | 0.04 | OrthoFinder | |
| PTI_05G04500.1 | No alias | Hypothetical protein | 0.03 | OrthoFinder | |
| PTI_06G03570.1 | No alias | Hypothetical protein | 0.02 | OrthoFinder | |
| PTI_07G01850.1 | No alias | Hypothetical protein | 0.04 | OrthoFinder | |
| PTI_08G00940.1 | No alias | Hypothetical protein | 0.05 | OrthoFinder | |
| PTI_08G04530.1 | No alias | Hypothetical protein | 0.01 | OrthoFinder | |
| PTI_08G04540.1 | No alias | Hypothetical protein | 0.01 | OrthoFinder | |
| PTI_08G04550.1 | No alias | Hypothetical protein | 0.03 | OrthoFinder | |
| PTI_09G04600.1 | No alias | Hypothetical protein | 0.04 | OrthoFinder | |
| PTI_11G00010.1 | No alias | Reverse transcriptase, RNA-dependent DNA polymerase... | 0.03 | OrthoFinder | |
| PTI_11G00100.1 | No alias | Hypothetical protein | 0.01 | OrthoFinder | |
| PTI_11G00110.1 | No alias | Reverse transcriptase, RNA-dependent DNA polymerase... | 0.04 | OrthoFinder | |
| PTI_11G00120.1 | No alias | Reverse transcriptase, RNA-dependent DNA polymerase... | 0.03 | OrthoFinder | |
| PTI_11G00140.1 | No alias | Hypothetical protein | 0.02 | OrthoFinder | |
| PTI_11G00160.1 | No alias | Hypothetical protein | 0.03 | OrthoFinder | |
| PTI_11G00170.1 | No alias | Hypothetical protein | 0.03 | OrthoFinder | |
| PTI_11G00180.1 | No alias | Hypothetical protein | 0.03 | OrthoFinder | |
| PTI_11G04480.1 | No alias | Hypothetical protein | 0.01 | OrthoFinder | |
| PTI_11G04490.1 | No alias | Hypothetical protein | 0.03 | OrthoFinder | |
| PTI_13G00100.1 | No alias | Hypothetical protein | 0.01 | OrthoFinder | |
| PTI_13G00120.1 | No alias | Hypothetical protein | 0.01 | OrthoFinder | |
| PTI_13G00130.1 | No alias | Hypothetical protein | 0.01 | OrthoFinder | |
| PTI_13G00140.1 | No alias | Reverse transcriptase, RNA-dependent DNA polymerase... | 0.03 | OrthoFinder | |
| PTI_13G02530.1 | No alias | Hypothetical protein | 0.03 | OrthoFinder | |
| PTI_14G01300.1 | No alias | Hypothetical protein | 0.03 | OrthoFinder | |
| PTI_14G02450.1 | No alias | Hypothetical protein | 0.03 | OrthoFinder | |
| PTI_16G00060.1 | No alias | Dehydrogenase, E1 component; Reverse transcriptase,... | 0.04 | OrthoFinder | |
| PTI_17G02240.1 | No alias | Reverse transcriptase, RNA-dependent DNA polymerase... | 0.03 | OrthoFinder | |
| PTI_17G02980.1 | No alias | Reverse transcriptase, RNA-dependent DNA polymerase... | 0.03 | OrthoFinder | |
| PTI_17G02990.1 | No alias | Hypothetical protein | 0.03 | OrthoFinder | |
| PTI_18G00060.1 | No alias | Hypothetical protein | 0.01 | OrthoFinder | |
| PTI_18G00120.1 | No alias | Hypothetical protein | 0.03 | OrthoFinder | |
| PTI_19G01430.1 | No alias | Hypothetical protein | 0.03 | OrthoFinder | |
| PTI_19G02870.1 | No alias | Reverse transcriptase, RNA-dependent DNA polymerase... | 0.03 | OrthoFinder | |
| PTI_22G00430.1 | No alias | Hypothetical protein | 0.02 | OrthoFinder | |
| PTI_22G00450.1 | No alias | Reverse transcriptase, RNA-dependent DNA polymerase... | 0.03 | OrthoFinder | |
| PTI_24G01110.1 | No alias | Reverse transcriptase, RNA-dependent DNA polymerase... | 0.05 | OrthoFinder | |
| PTI_26G00300.1 | No alias | Hypothetical protein | 0.03 | OrthoFinder | |
| PTI_26G00310.1 | No alias | Hypothetical protein | 0.03 | OrthoFinder | |
| PTI_26G01640.1 | No alias | Reverse transcriptase, RNA-dependent DNA polymerase... | 0.03 | OrthoFinder | |
| PTI_29G00100.1 | No alias | Reverse transcriptase, RNA-dependent DNA polymerase... | 0.04 | OrthoFinder | |
| PTI_29G00120.1 | No alias | Hypothetical protein | 0.01 | OrthoFinder | |
| PTI_29G00130.1 | No alias | Hypothetical protein | 0.03 | OrthoFinder | |
| PTI_29G00620.1 | No alias | Hypothetical protein | 0.05 | OrthoFinder | |
| PTI_30G00040.1 | No alias | Hypothetical protein | 0.03 | OrthoFinder | |
| PTI_30G00100.1 | No alias | Hypothetical protein | 0.04 | OrthoFinder | |
| PTI_31G00160.1 | No alias | Hypothetical protein | 0.04 | OrthoFinder | |
| PTI_31G00170.1 | No alias | Hypothetical protein | 0.01 | OrthoFinder | |
| PTI_33G00010.1 | No alias | Reverse transcriptase, RNA-dependent DNA polymerase... | 0.03 | OrthoFinder | |
| PTI_33G00260.1 | No alias | Reverse transcriptase, RNA-dependent DNA polymerase... | 0.03 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005436 | sodium:phosphate symporter activity | IEP | Enrichment |
| BP | GO:0006772 | thiamine metabolic process | IEP | Enrichment |
| MF | GO:0008963 | phospho-N-acetylmuramoyl-pentapeptide-transferase activity | IEP | Enrichment |
| BP | GO:0009228 | thiamine biosynthetic process | IEP | Enrichment |
| MF | GO:0015081 | sodium ion transmembrane transporter activity | IEP | Enrichment |
| MF | GO:0015294 | solute:cation symporter activity | IEP | Enrichment |
| MF | GO:0015370 | solute:sodium symporter activity | IEP | Enrichment |
| CC | GO:0017119 | Golgi transport complex | IEP | Enrichment |
| CC | GO:0042597 | periplasmic space | IEP | Enrichment |
| BP | GO:0042723 | thiamine-containing compound metabolic process | IEP | Enrichment |
| BP | GO:0042724 | thiamine-containing compound biosynthetic process | IEP | Enrichment |
| BP | GO:0044341 | sodium-dependent phosphate transport | IEP | Enrichment |
| BP | GO:0072527 | pyrimidine-containing compound metabolic process | IEP | Enrichment |
| BP | GO:0072528 | pyrimidine-containing compound biosynthetic process | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR013103 | RVT_2 | 275 | 478 |
| No external refs found! |