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  5. PTI_25G00490.1

PTI_25G00490.1


Description : BEACH domain; Domain of unknown function DUF4704; PH-BEACH domain; WD40 repeat [Interproscan].


Gene families : OG_01_0000641 (OrthoFinder) Phylogenetic Tree(s): OG0000641_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_25G00490.1
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021108.14 tig00021108_g18307.t1 Protein SPIRRIG OS=Arabidopsis thaliana 0.01 OrthoFinder
Cre06.g274950 30778828 BEACH domain-containing protein A2 OS=Arabidopsis thaliana 0.02 OrthoFinder
EOD19568 No alias BEACH domain [Interproscan]. 0.04 OrthoFinder
EOD31744 No alias BEACH domain [Interproscan]. 0.02 OrthoFinder
OT_04G03470.1 No alias PH-BEACH domain; Domain of unknown function DUF4704;... 0.02 OrthoFinder
OT_06G01490.1 No alias PH-BEACH domain; BEACH domain [Interproscan]. 0.03 OrthoFinder
Sro1247_g255870.1 Contig2843.g22827 Lipopolysaccharide-responsive and beige-like anchor protein 0.07 OrthoFinder
Sro1247_g255870.2 No alias Hypothetical protein 0.02 OrthoFinder
Sro1247_g255870.3 No alias BEACH domain; PH-BEACH domain [Interproscan]. 0.07 OrthoFinder
Sro1730_g294110.1 Contig2449.g20048 Lipopolysaccharide-responsive and beige-like anchor protein 0.07 OrthoFinder
Sro436_g142590.1 Contig228.g2747 Lipopolysaccharide-responsive and beige-like anchor protein 0.02 OrthoFinder
Sro639_g179700.1 Contig197.g2291 Lipopolysaccharide-responsive and beige-like anchor protein 0.15 OrthoFinder
TP13G00130.1 No alias BEACH domain [Interproscan]. 0.03 OrthoFinder
TP14G02620.1 No alias BEACH domain [Interproscan]. 0.04 OrthoFinder
XM_002503222.1 MICPUN_82791, 82791 BEACH domain; WD40 repeat; PH-BEACH domain [Interproscan]. 0.02 OrthoFinder
XM_003061239.1 MicpuC2_902, 902 BEACH domain; WD40 repeat [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Enrichment
BP GO:0000724 double-strand break repair via homologous recombination IEP Enrichment
BP GO:0000725 recombinational repair IEP Enrichment
MF GO:0004402 histone acetyltransferase activity IEP Enrichment
BP GO:0006302 double-strand break repair IEP Enrichment
BP GO:0006310 DNA recombination IEP Enrichment
BP GO:0006473 protein acetylation IEP Enrichment
BP GO:0006475 internal protein amino acid acetylation IEP Enrichment
BP GO:0006887 exocytosis IEP Enrichment
MF GO:0008270 zinc ion binding IEP Enrichment
BP GO:0009165 nucleotide biosynthetic process IEP Enrichment
BP GO:0009187 cyclic nucleotide metabolic process IEP Enrichment
BP GO:0009190 cyclic nucleotide biosynthetic process IEP Enrichment
BP GO:0016569 covalent chromatin modification IEP Enrichment
BP GO:0016570 histone modification IEP Enrichment
BP GO:0016573 histone acetylation IEP Enrichment
BP GO:0018205 peptidyl-lysine modification IEP Enrichment
BP GO:0018393 internal peptidyl-lysine acetylation IEP Enrichment
BP GO:0018394 peptidyl-lysine acetylation IEP Enrichment
BP GO:0032940 secretion by cell IEP Enrichment
MF GO:0034212 peptide N-acetyltransferase activity IEP Enrichment
BP GO:0035556 intracellular signal transduction IEP Enrichment
MF GO:0043531 ADP binding IEP Enrichment
BP GO:0043543 protein acylation IEP Enrichment
BP GO:0046903 secretion IEP Enrichment
MF GO:0046914 transition metal ion binding IEP Enrichment
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Enrichment
CC GO:0071203 WASH complex IEP Enrichment
BP GO:0140352 export from cell IEP Enrichment
BP GO:1901293 nucleoside phosphate biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR031570 DUF4704 831 976
IPR000409 BEACH_dom 2259 2539
IPR001680 WD40_repeat 2785 2820
IPR001680 WD40_repeat 2724 2754
IPR023362 PH-BEACH_dom 2141 2238
No external refs found!