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Description : Alginate lyase domain [Interproscan].
Gene families : OG_01_0005138 (OrthoFinder) Phylogenetic Tree(s): OG0005138_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: PTI_25G00140.1 | |
| Cluster | HCCA: Cluster_11 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| PTI_00G03870.1 | No alias | Hypothetical protein | 0.05 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0016829 | lyase activity | IEA | Interproscan |
| CC | GO:0042597 | periplasmic space | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005436 | sodium:phosphate symporter activity | IEP | Enrichment |
| MF | GO:0005506 | iron ion binding | IEP | Enrichment |
| BP | GO:0006772 | thiamine metabolic process | IEP | Enrichment |
| MF | GO:0008963 | phospho-N-acetylmuramoyl-pentapeptide-transferase activity | IEP | Enrichment |
| BP | GO:0009228 | thiamine biosynthetic process | IEP | Enrichment |
| MF | GO:0015081 | sodium ion transmembrane transporter activity | IEP | Enrichment |
| MF | GO:0015294 | solute:cation symporter activity | IEP | Enrichment |
| MF | GO:0015370 | solute:sodium symporter activity | IEP | Enrichment |
| MF | GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | IEP | Enrichment |
| MF | GO:0020037 | heme binding | IEP | Enrichment |
| MF | GO:0031625 | ubiquitin protein ligase binding | IEP | Enrichment |
| BP | GO:0042723 | thiamine-containing compound metabolic process | IEP | Enrichment |
| BP | GO:0042724 | thiamine-containing compound biosynthetic process | IEP | Enrichment |
| BP | GO:0044341 | sodium-dependent phosphate transport | IEP | Enrichment |
| MF | GO:0044389 | ubiquitin-like protein ligase binding | IEP | Enrichment |
| MF | GO:0044877 | protein-containing complex binding | IEP | Enrichment |
| MF | GO:0046906 | tetrapyrrole binding | IEP | Enrichment |
| BP | GO:0072527 | pyrimidine-containing compound metabolic process | IEP | Enrichment |
| BP | GO:0072528 | pyrimidine-containing compound biosynthetic process | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR008397 | Alginate_lyase_dom | 505 | 677 |
| No external refs found! |