Description : tRNA-dihydrouridine synthase [Interproscan].
Gene families : OG_01_0001084 (OrthoFinder) Phylogenetic Tree(s): OG0001084_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: PTI_22G02090.1 | |
Cluster | HCCA: Cluster_38 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
OT_08G03610.1 | No alias | tRNA-dihydrouridine synthase [Interproscan]. | 0.02 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0008033 | tRNA processing | IEA | Interproscan |
MF | GO:0017150 | tRNA dihydrouridine synthase activity | IEA | Interproscan |
MF | GO:0050660 | flavin adenine dinucleotide binding | IEA | Interproscan |
BP | GO:0055114 | obsolete oxidation-reduction process | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003712 | transcription coregulator activity | IEP | Enrichment |
CC | GO:0005667 | transcription regulator complex | IEP | Enrichment |
BP | GO:0006270 | DNA replication initiation | IEP | Enrichment |
BP | GO:0006357 | regulation of transcription by RNA polymerase II | IEP | Enrichment |
BP | GO:0006766 | vitamin metabolic process | IEP | Enrichment |
BP | GO:0006767 | water-soluble vitamin metabolic process | IEP | Enrichment |
MF | GO:0008168 | methyltransferase activity | IEP | Enrichment |
BP | GO:0009110 | vitamin biosynthetic process | IEP | Enrichment |
BP | GO:0009235 | cobalamin metabolic process | IEP | Enrichment |
BP | GO:0009236 | cobalamin biosynthetic process | IEP | Enrichment |
CC | GO:0016592 | mediator complex | IEP | Enrichment |
MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | Enrichment |
MF | GO:0016852 | sirohydrochlorin cobaltochelatase activity | IEP | Enrichment |
MF | GO:0016868 | intramolecular transferase activity, phosphotransferases | IEP | Enrichment |
BP | GO:0033014 | tetrapyrrole biosynthetic process | IEP | Enrichment |
MF | GO:0035596 | methylthiotransferase activity | IEP | Enrichment |
BP | GO:0042364 | water-soluble vitamin biosynthetic process | IEP | Enrichment |
MF | GO:0050497 | alkylthioltransferase activity | IEP | Enrichment |
MF | GO:0051536 | iron-sulfur cluster binding | IEP | Enrichment |
MF | GO:0051539 | 4 iron, 4 sulfur cluster binding | IEP | Enrichment |
MF | GO:0051540 | metal cluster binding | IEP | Enrichment |
MF | GO:0140110 | transcription regulator activity | IEP | Enrichment |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001269 | DUS_fam | 61 | 436 |
No external refs found! |