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  5. PTI_22G01600.1

PTI_22G01600.1


Description : SET domain; PWWP domain; Zinc finger, PHD-finger; Bromodomain; FY-rich, N-terminal; PHD-like zinc-binding domain; FY-rich, C-terminal [Interproscan].


Gene families : OG_01_0000051 (OrthoFinder) Phylogenetic Tree(s): OG0000051_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_22G01600.1
Cluster HCCA: Cluster_96

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001073.18 tig00001073_g6826.t1 Chromatin organisation.histone modifications.histone... 0.02 OrthoFinder
Cre09.g392542 30780316 Chromatin organisation.histone modifications.histone... 0.02 OrthoFinder
Cre11.g475950 30775481 Histone-lysine N-methyltransferase ATXR7 OS=Arabidopsis thaliana 0.02 OrthoFinder
Cre12.g515050 30791872 Histone-lysine N-methyltransferase ATX3 OS=Arabidopsis thaliana 0.02 OrthoFinder
Cre17.g746247 30782096 Chromatin organisation.histone modifications.histone... 0.01 OrthoFinder
Cz02g12260.t1 No alias PWWP domain; PHD-finger; PHD-zinc-finger like domain;... 0.02 OrthoFinder
Cz02g16090.t1 No alias SET domain [Interproscan]. 0.03 OrthoFinder
Cz03g13010.t1 No alias PWWP domain; SET domain; AWS domain [Interproscan]. 0.02 OrthoFinder
Cz04g17250.t1 No alias AWS domain; SET domain; Zinc finger, CW-type [Interproscan]. 0.02 OrthoFinder
OT_14G01610.1 No alias SET domain [Interproscan]. 0.06 OrthoFinder
Sro117_g057370.1 Contig3937.g30181 36 and H4 lysine-20 specific 0.03 OrthoFinder
Sro157_g071400.1 Contig2362.g19430 36 and H4 lysine-20 specific 0.02 OrthoFinder
Sro2775_g336830.1 Contig927.g9706 Lysine N-methyltransferase, H3 lysine-4 specific 0.04 OrthoFinder
Sro72_g039840.1 Contig1459.g13383 36 and H4 lysine-20 specific 0.03 OrthoFinder
Sro84_g045070.1 Contig220.g2640 36 and H4 lysine-20 specific 0.05 OrthoFinder
Transcript_contig_54729 54729 SET domain; Pre-SET CXC domain [Interproscan]. 0.02 OrthoFinder
Transcript_contig_59962 59962 SET domain [Interproscan]. 0.01 OrthoFinder
Vocar.0006s0306.1 32894358 PHD-finger; SAND domain; PHD-zinc-finger like domain... 0.01 OrthoFinder
XM_002505429.1 MICPUN_63548, 63548 Set domain protein 0.02 OrthoFinder
XM_003064447.1 MicpuC2_54214, 54214 Set domain protein 0.02 OrthoFinder
lcl|BLLF01002303.1_cds_GFH23572.1_18049 HaLaN_21201, GFH23572 Histone-lysine N-methyltransferase 0.03 OrthoFinder
lcl|LHPG02000002.1_cds_PRW60593.1_4707 PRW60593 Histone-lysine N-methyltransferase ASHH2 0.03 OrthoFinder
lcl|LHPG02000007.1_cds_PRW57331.1_9054 PRW57331 Microtubule-associated futsch isoform X1 0.02 OrthoFinder
lcl|LHPG02000010.1_cds_PRW51115.1_1157 PRW51115 Histone-lysine N-methyltransferase 0.02 OrthoFinder
lcl|LHPG02000014.1_cds_PRW39193.1_2673 PRW39193 Histone-lysine N-methyltransferase ATX2-like 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
CC GO:0005634 nucleus IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Enrichment
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Enrichment
BP GO:0000398 mRNA splicing, via spliceosome IEP Enrichment
CC GO:0000808 origin recognition complex IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003839 gamma-glutamylcyclotransferase activity IEP Enrichment
MF GO:0004112 cyclic-nucleotide phosphodiesterase activity IEP Enrichment
MF GO:0004114 3',5'-cyclic-nucleotide phosphodiesterase activity IEP Enrichment
MF GO:0004402 histone acetyltransferase activity IEP Enrichment
MF GO:0004652 polynucleotide adenylyltransferase activity IEP Enrichment
CC GO:0005643 nuclear pore IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006355 regulation of transcription, DNA-templated IEP Enrichment
BP GO:0006473 protein acetylation IEP Enrichment
BP GO:0006475 internal protein amino acid acetylation IEP Enrichment
BP GO:0006575 cellular modified amino acid metabolic process IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006749 glutathione metabolic process IEP Enrichment
BP GO:0006751 glutathione catabolic process IEP Enrichment
BP GO:0006753 nucleoside phosphate metabolic process IEP Enrichment
BP GO:0006793 phosphorus metabolic process IEP Enrichment
BP GO:0006796 phosphate-containing compound metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0006913 nucleocytoplasmic transport IEP Enrichment
BP GO:0007165 signal transduction IEP Enrichment
MF GO:0008081 phosphoric diester hydrolase activity IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0008270 zinc ion binding IEP Enrichment
BP GO:0009117 nucleotide metabolic process IEP Enrichment
BP GO:0009165 nucleotide biosynthetic process IEP Enrichment
BP GO:0009187 cyclic nucleotide metabolic process IEP Enrichment
BP GO:0009190 cyclic nucleotide biosynthetic process IEP Enrichment
BP GO:0009889 regulation of biosynthetic process IEP Enrichment
BP GO:0010468 regulation of gene expression IEP Enrichment
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Enrichment
BP GO:0016569 covalent chromatin modification IEP Enrichment
BP GO:0016570 histone modification IEP Enrichment
BP GO:0016573 histone acetylation IEP Enrichment
MF GO:0016779 nucleotidyltransferase activity IEP Enrichment
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Enrichment
MF GO:0016840 carbon-nitrogen lyase activity IEP Enrichment
MF GO:0016842 amidine-lyase activity IEP Enrichment
MF GO:0017056 structural constituent of nuclear pore IEP Enrichment
BP GO:0018130 heterocycle biosynthetic process IEP Enrichment
BP GO:0018205 peptidyl-lysine modification IEP Enrichment
BP GO:0018393 internal peptidyl-lysine acetylation IEP Enrichment
BP GO:0018394 peptidyl-lysine acetylation IEP Enrichment
CC GO:0018995 host cellular component IEP Enrichment
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0019222 regulation of metabolic process IEP Enrichment
BP GO:0019438 aromatic compound biosynthetic process IEP Enrichment
BP GO:0019637 organophosphate metabolic process IEP Enrichment
CC GO:0030127 COPII vesicle coat IEP Enrichment
BP GO:0031323 regulation of cellular metabolic process IEP Enrichment
BP GO:0031326 regulation of cellular biosynthetic process IEP Enrichment
CC GO:0033643 host cell part IEP Enrichment
CC GO:0033646 host intracellular part IEP Enrichment
CC GO:0033647 host intracellular organelle IEP Enrichment
CC GO:0033648 host intracellular membrane-bounded organelle IEP Enrichment
MF GO:0034061 DNA polymerase activity IEP Enrichment
MF GO:0034212 peptide N-acetyltransferase activity IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Enrichment
BP GO:0035556 intracellular signal transduction IEP Enrichment
CC GO:0042025 host cell nucleus IEP Enrichment
BP GO:0042219 cellular modified amino acid catabolic process IEP Enrichment
MF GO:0042578 phosphoric ester hydrolase activity IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
BP GO:0043171 peptide catabolic process IEP Enrichment
BP GO:0043543 protein acylation IEP Enrichment
BP GO:0043631 RNA polyadenylation IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044273 sulfur compound catabolic process IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
BP GO:0046907 intracellular transport IEP Enrichment
BP GO:0050789 regulation of biological process IEP Enrichment
BP GO:0050794 regulation of cellular process IEP Enrichment
BP GO:0051169 nuclear transport IEP Enrichment
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Enrichment
BP GO:0051252 regulation of RNA metabolic process IEP Enrichment
BP GO:0051649 establishment of localization in cell IEP Enrichment
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Enrichment
BP GO:0060255 regulation of macromolecule metabolic process IEP Enrichment
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Enrichment
BP GO:0065007 biological regulation IEP Enrichment
MF GO:0070403 NAD+ binding IEP Enrichment
MF GO:0070566 adenylyltransferase activity IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:0080090 regulation of primary metabolic process IEP Enrichment
BP GO:0090407 organophosphate biosynthetic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment
MF GO:0140110 transcription regulator activity IEP Enrichment
BP GO:1901293 nucleoside phosphate biosynthetic process IEP Enrichment
BP GO:1901362 organic cyclic compound biosynthetic process IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Enrichment
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Enrichment
BP GO:2001141 regulation of RNA biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR000313 PWWP_dom 252 333
IPR003889 FYrich_C 1582 1668
IPR001214 SET_dom 1793 1902
IPR019787 Znf_PHD-finger 898 947
IPR003888 FYrich_N 1526 1575
IPR001487 Bromodomain 714 792
No external refs found!