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Description : Reverse transcriptase, RNA-dependent DNA polymerase [Interproscan].
Gene families : OG_01_0000022 (OrthoFinder) Phylogenetic Tree(s): OG0000022_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: PTI_19G01440.1 | |
| Cluster | HCCA: Cluster_36 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| PTI_00G00760.1 | No alias | Hypothetical protein | 0.03 | OrthoFinder | |
| PTI_00G00790.1 | No alias | Hypothetical protein | 0.04 | OrthoFinder | |
| PTI_00G00820.1 | No alias | Hypothetical protein | 0.08 | OrthoFinder | |
| PTI_00G00830.1 | No alias | Hypothetical protein | 0.05 | OrthoFinder | |
| PTI_00G01930.1 | No alias | Hypothetical protein | 0.03 | OrthoFinder | |
| PTI_00G02780.1 | No alias | Reverse transcriptase, RNA-dependent DNA polymerase... | 0.05 | OrthoFinder | |
| PTI_00G03300.1 | No alias | Hypothetical protein | 0.05 | OrthoFinder | |
| PTI_00G03360.1 | No alias | Hypothetical protein | 0.05 | OrthoFinder | |
| PTI_00G03370.1 | No alias | Hypothetical protein | 0.05 | OrthoFinder | |
| PTI_00G03380.1 | No alias | Hypothetical protein | 0.04 | OrthoFinder | |
| PTI_00G03740.1 | No alias | Hypothetical protein | 0.06 | OrthoFinder | |
| PTI_02G00010.1 | No alias | Hypothetical protein | 0.03 | OrthoFinder | |
| PTI_02G04470.1 | No alias | Reverse transcriptase, RNA-dependent DNA polymerase... | 0.05 | OrthoFinder | |
| PTI_03G04560.1 | No alias | Hypothetical protein | 0.03 | OrthoFinder | |
| PTI_04G05890.1 | No alias | Hypothetical protein | 0.04 | OrthoFinder | |
| PTI_05G04500.1 | No alias | Hypothetical protein | 0.08 | OrthoFinder | |
| PTI_07G00160.1 | No alias | Hypothetical protein | 0.03 | OrthoFinder | |
| PTI_07G01850.1 | No alias | Hypothetical protein | 0.03 | OrthoFinder | |
| PTI_08G00940.1 | No alias | Hypothetical protein | 0.05 | OrthoFinder | |
| PTI_08G04530.1 | No alias | Hypothetical protein | 0.04 | OrthoFinder | |
| PTI_08G04540.1 | No alias | Hypothetical protein | 0.04 | OrthoFinder | |
| PTI_08G04590.1 | No alias | Hypothetical protein | 0.03 | OrthoFinder | |
| PTI_10G00130.1 | No alias | Reverse transcriptase, RNA-dependent DNA polymerase... | 0.06 | OrthoFinder | |
| PTI_11G00100.1 | No alias | Hypothetical protein | 0.04 | OrthoFinder | |
| PTI_11G00140.1 | No alias | Hypothetical protein | 0.03 | OrthoFinder | |
| PTI_11G00160.1 | No alias | Hypothetical protein | 0.05 | OrthoFinder | |
| PTI_11G04480.1 | No alias | Hypothetical protein | 0.04 | OrthoFinder | |
| PTI_11G04530.1 | No alias | Hypothetical protein | 0.06 | OrthoFinder | |
| PTI_13G00100.1 | No alias | Hypothetical protein | 0.04 | OrthoFinder | |
| PTI_13G00110.1 | No alias | Hypothetical protein | 0.04 | OrthoFinder | |
| PTI_13G00130.1 | No alias | Hypothetical protein | 0.04 | OrthoFinder | |
| PTI_13G02530.1 | No alias | Hypothetical protein | 0.05 | OrthoFinder | |
| PTI_14G01300.1 | No alias | Hypothetical protein | 0.03 | OrthoFinder | |
| PTI_14G02460.1 | No alias | Hypothetical protein | 0.04 | OrthoFinder | |
| PTI_18G00120.1 | No alias | Hypothetical protein | 0.04 | OrthoFinder | |
| PTI_18G00340.1 | No alias | Hypothetical protein | 0.03 | OrthoFinder | |
| PTI_18G00350.1 | No alias | Hypothetical protein | 0.08 | OrthoFinder | |
| PTI_18G00370.1 | No alias | Hypothetical protein | 0.06 | OrthoFinder | |
| PTI_19G03130.1 | No alias | Hypothetical protein | 0.07 | OrthoFinder | |
| PTI_20G00020.1 | No alias | Hypothetical protein | 0.03 | OrthoFinder | |
| PTI_22G00420.1 | No alias | Hypothetical protein | 0.04 | OrthoFinder | |
| PTI_27G00020.1 | No alias | Hypothetical protein | 0.05 | OrthoFinder | |
| PTI_30G00040.1 | No alias | Hypothetical protein | 0.05 | OrthoFinder | |
| PTI_31G00150.1 | No alias | Hypothetical protein | 0.05 | OrthoFinder | |
| PTI_31G00160.1 | No alias | Hypothetical protein | 0.06 | OrthoFinder | |
| PTI_31G00170.1 | No alias | Hypothetical protein | 0.04 | OrthoFinder | |
| PTI_33G00190.1 | No alias | Reverse transcriptase, RNA-dependent DNA polymerase... | 0.03 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000075 | cell cycle checkpoint signaling | IEP | Enrichment |
| BP | GO:0000077 | DNA damage checkpoint signaling | IEP | Enrichment |
| BP | GO:0010564 | regulation of cell cycle process | IEP | Enrichment |
| BP | GO:0010948 | negative regulation of cell cycle process | IEP | Enrichment |
| BP | GO:0031570 | DNA integrity checkpoint signaling | IEP | Enrichment |
| BP | GO:0042770 | signal transduction in response to DNA damage | IEP | Enrichment |
| MF | GO:0043169 | cation binding | IEP | Enrichment |
| BP | GO:0045786 | negative regulation of cell cycle | IEP | Enrichment |
| MF | GO:0046872 | metal ion binding | IEP | Enrichment |
| MF | GO:0046914 | transition metal ion binding | IEP | Enrichment |
| BP | GO:0048519 | negative regulation of biological process | IEP | Enrichment |
| BP | GO:0048523 | negative regulation of cellular process | IEP | Enrichment |
| BP | GO:0051726 | regulation of cell cycle | IEP | Enrichment |
| BP | GO:1901987 | regulation of cell cycle phase transition | IEP | Enrichment |
| BP | GO:1901988 | negative regulation of cell cycle phase transition | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR013103 | RVT_2 | 1189 | 1322 |
| No external refs found! |