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  5. PTI_19G00770.1

PTI_19G00770.1


Description : Regulator of chromosome condensation, RCC1 [Interproscan].


Gene families : OG_01_0000020 (OrthoFinder) Phylogenetic Tree(s): OG0000020_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_19G00770.1
Cluster HCCA: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
Sro188_g081280.1 Contig1383.g12729 RCC1 and BTB domain-containing protein 2 0.02 OrthoFinder
Transcript_contig_79616 79616 Regulator of chromosome condensation, RCC1 [Interproscan]. 0.01 OrthoFinder
lcl|BLLF01002292.1_cds_GFH23517.1_17994 HaLaN_21140, GFH23517 Regulator of chromosome condensation (RCC1) repeat;... 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Enrichment
BP GO:0000097 sulfur amino acid biosynthetic process IEP Enrichment
MF GO:0005507 copper ion binding IEP Enrichment
BP GO:0006534 cysteine metabolic process IEP Enrichment
BP GO:0006535 cysteine biosynthetic process from serine IEP Enrichment
BP GO:0006563 L-serine metabolic process IEP Enrichment
MF GO:0008374 O-acyltransferase activity IEP Enrichment
MF GO:0009001 serine O-acetyltransferase activity IEP Enrichment
BP GO:0009069 serine family amino acid metabolic process IEP Enrichment
BP GO:0009070 serine family amino acid biosynthetic process IEP Enrichment
BP GO:0009116 nucleoside metabolic process IEP Enrichment
MF GO:0015204 urea transmembrane transporter activity IEP Enrichment
BP GO:0015840 urea transport IEP Enrichment
MF GO:0016412 serine O-acyltransferase activity IEP Enrichment
MF GO:0016413 O-acetyltransferase activity IEP Enrichment
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Enrichment
BP GO:0019344 cysteine biosynthetic process IEP Enrichment
BP GO:0019755 one-carbon compound transport IEP Enrichment
BP GO:0022900 electron transport chain IEP Enrichment
BP GO:0042886 amide transport IEP Enrichment
MF GO:0042887 amide transmembrane transporter activity IEP Enrichment
BP GO:0044272 sulfur compound biosynthetic process IEP Enrichment
BP GO:0071918 urea transmembrane transport IEP Enrichment
BP GO:1901657 glycosyl compound metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR000408 Reg_chr_condens 236 284
IPR000408 Reg_chr_condens 389 438
IPR000408 Reg_chr_condens 287 344
IPR000408 Reg_chr_condens 119 166
No external refs found!