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  5. PTI_18G02400.1

PTI_18G02400.1


Description : Transcription factor, GTP-binding domain; Elongation factor EFG, domain V-like; Translation elongation factor EFTu-like, domain 2; GTP-binding protein LepA, C-terminal [Interproscan].


Gene families : OG_01_0000765 (OrthoFinder) Phylogenetic Tree(s): OG0000765_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_18G02400.1
Cluster HCCA: Cluster_102

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000912.22 tig00000912_g5427.t1 Translation factor GUF1 homolog, chloroplastic... 0.02 OrthoFinder
Cz01g20010.t1 No alias GTP-binding protein LepA, C-terminal; Elongation factor... 0.02 OrthoFinder
XM_002507800.1 MICPUN_60558, 60558 Protein-synthesizing GTPase (LEPA) 0.02 OrthoFinder
XM_003062151.1 MicpuC2_51778, 51778 Protein-synthesizing GTPase (LEPA) 0.03 OrthoFinder
lcl|LHPG02000015.1_cds_PRW33873.1_2870 PRW33873 Translation factor GUF1 mitochondrial isoform X1 0.02 OrthoFinder
lcl|LHPG02000018.1_cds_PRW32934.1_3835 PRW32934 Elongation factor 4 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP Enrichment
CC GO:0000152 nuclear ubiquitin ligase complex IEP Enrichment
MF GO:0002161 aminoacyl-tRNA editing activity IEP Enrichment
MF GO:0003848 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity IEP Enrichment
MF GO:0004827 proline-tRNA ligase activity IEP Enrichment
MF GO:0005047 signal recognition particle binding IEP Enrichment
MF GO:0005048 signal sequence binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
CC GO:0005643 nuclear pore IEP Enrichment
CC GO:0005669 transcription factor TFIID complex IEP Enrichment
CC GO:0005680 anaphase-promoting complex IEP Enrichment
CC GO:0005786 signal recognition particle, endoplasmic reticulum targeting IEP Enrichment
BP GO:0006338 chromatin remodeling IEP Enrichment
BP GO:0006433 prolyl-tRNA aminoacylation IEP Enrichment
BP GO:0006612 protein targeting to membrane IEP Enrichment
BP GO:0006613 cotranslational protein targeting to membrane IEP Enrichment
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Enrichment
BP GO:0006760 folic acid-containing compound metabolic process IEP Enrichment
BP GO:0006886 intracellular protein transport IEP Enrichment
BP GO:0007346 regulation of mitotic cell cycle IEP Enrichment
MF GO:0008312 7S RNA binding IEP Enrichment
BP GO:0009396 folic acid-containing compound biosynthetic process IEP Enrichment
BP GO:0010564 regulation of cell cycle process IEP Enrichment
BP GO:0010965 regulation of mitotic sister chromatid separation IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016778 diphosphotransferase activity IEP Enrichment
MF GO:0017056 structural constituent of nuclear pore IEP Enrichment
BP GO:0030071 regulation of mitotic metaphase/anaphase transition IEP Enrichment
MF GO:0030942 endoplasmic reticulum signal peptide binding IEP Enrichment
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP Enrichment
MF GO:0031625 ubiquitin protein ligase binding IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
BP GO:0033043 regulation of organelle organization IEP Enrichment
BP GO:0033044 regulation of chromosome organization IEP Enrichment
BP GO:0033045 regulation of sister chromatid segregation IEP Enrichment
MF GO:0035596 methylthiotransferase activity IEP Enrichment
MF GO:0042277 peptide binding IEP Enrichment
BP GO:0042398 cellular modified amino acid biosynthetic process IEP Enrichment
BP GO:0042558 pteridine-containing compound metabolic process IEP Enrichment
BP GO:0042559 pteridine-containing compound biosynthetic process IEP Enrichment
MF GO:0043021 ribonucleoprotein complex binding IEP Enrichment
MF GO:0044389 ubiquitin-like protein ligase binding IEP Enrichment
MF GO:0044877 protein-containing complex binding IEP Enrichment
CC GO:0048500 signal recognition particle IEP Enrichment
MF GO:0050497 alkylthioltransferase activity IEP Enrichment
BP GO:0051128 regulation of cellular component organization IEP Enrichment
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP Enrichment
BP GO:0051668 localization within membrane IEP Enrichment
BP GO:0051983 regulation of chromosome segregation IEP Enrichment
BP GO:0072657 protein localization to membrane IEP Enrichment
BP GO:0090150 establishment of protein localization to membrane IEP Enrichment
CC GO:0090575 RNA polymerase II transcription regulator complex IEP Enrichment
CC GO:0140513 nuclear protein-containing complex IEP Enrichment
BP GO:1901987 regulation of cell cycle phase transition IEP Enrichment
BP GO:1901990 regulation of mitotic cell cycle phase transition IEP Enrichment
BP GO:1902099 regulation of metaphase/anaphase transition of cell cycle IEP Enrichment
BP GO:1905818 regulation of chromosome separation IEP Enrichment
InterPro domains Description Start Stop
IPR004161 EFTu-like_2 291 360
IPR013842 LepA_CTD 584 690
IPR000795 T_Tr_GTP-bd_dom 89 267
IPR000640 EFG_V-like 495 580
No external refs found!