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  5. PTI_18G02040.1

PTI_18G02040.1


Description : Amino acid transporter, transmembrane domain [Interproscan].


Gene families : OG_01_0000223 (OrthoFinder) Phylogenetic Tree(s): OG0000223_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_18G02040.1
Cluster HCCA: Cluster_106

Target Alias Description ECC score Gene Family Method Actions
SymbC1.scaffold2087.4 2087.4 Amino acid transporter, transmembrane domain [Interproscan]. 0.01 OrthoFinder
Transcript_contig_55315 55315 Amino acid transporter, transmembrane domain [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003909 DNA ligase activity IEP Enrichment
MF GO:0003911 DNA ligase (NAD+) activity IEP Enrichment
MF GO:0003968 RNA-directed 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0004177 aminopeptidase activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
BP GO:0006486 protein glycosylation IEP Enrichment
BP GO:0006720 isoprenoid metabolic process IEP Enrichment
BP GO:0008299 isoprenoid biosynthetic process IEP Enrichment
MF GO:0008417 fucosyltransferase activity IEP Enrichment
BP GO:0015969 guanosine tetraphosphate metabolic process IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
BP GO:0016567 protein ubiquitination IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016757 glycosyltransferase activity IEP Enrichment
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Enrichment
BP GO:0032446 protein modification by small protein conjugation IEP Enrichment
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Enrichment
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Enrichment
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Enrichment
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP Enrichment
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Enrichment
BP GO:0043413 macromolecule glycosylation IEP Enrichment
BP GO:0070085 glycosylation IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
InterPro domains Description Start Stop
IPR013057 AA_transpt_TM 112 540
No external refs found!