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  5. PTI_17G02830.1

PTI_17G02830.1


Description : SET domain [Interproscan].


Gene families : OG_01_0000019 (OrthoFinder) Phylogenetic Tree(s): OG0000019_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_17G02830.1
Cluster HCCA: Cluster_68

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020965.56 tig00020965_g16868.t1 Histone-lysine N-methyltransferase ASHR1 OS=Arabidopsis thaliana 0.02 OrthoFinder
Cre01.g041100 30788888 Chromatin organisation.histone modifications.histone... 0.02 OrthoFinder
Cre15.g639056 30783645 No description available 0.02 OrthoFinder
Cz03g37010.t1 No alias SET domain [Interproscan]. 0.02 OrthoFinder
Cz04g25200.t1 No alias SET domain [Interproscan]. 0.02 OrthoFinder
Cz04g25210.t1 No alias Hypothetical protein 0.06 OrthoFinder
Dusal.0288s00004.1 33188439 Hypothetical protein 0.01 OrthoFinder
Dusal.0293s00006.1 33190178 SET domain [Interproscan]. 0.01 OrthoFinder
EOD06045 No alias SET domain [Interproscan]. 0.01 OrthoFinder
EOD10686 No alias SET domain; Zinc finger, MYND-type [Interproscan]. 0.03 OrthoFinder
EOD11074 No alias Hypothetical protein [Ensembl]. 0.05 OrthoFinder
EOD22522 No alias SET domain; Zinc finger, MYND-type [Interproscan]. 0.03 OrthoFinder
Sro772_g200340.1 Contig1005.g10125 SET 0.03 OrthoFinder
TP05G03200.1 No alias SET domain [Interproscan]. 0.11 OrthoFinder
TP08G03820.1 No alias SET domain [Interproscan]. 0.02 OrthoFinder
Vocar.0001s0087.1 32884780 SET domain [Interproscan]. 0.02 OrthoFinder
Vocar.0007s0334.1 32888106 SET domain [Interproscan]. 0.05 OrthoFinder
XM_002502912.1 MICPUN_59496, 59496 SET domain [Interproscan]. 0.04 OrthoFinder
XM_002506785.1 MICPUN_89128, 89128 Set domain protein 0.1 OrthoFinder
XM_003058744.1 MicpuC2_57921, 57921 Set domain protein 0.06 OrthoFinder
XM_003060994.1 MicpuC2_20125, 20125 Set domain protein 0.02 OrthoFinder
lcl|BLLF01000019.1_cds_GFH06025.1_502 HaLaN_00585, GFH06025 Hypothetical protein 0.01 OrthoFinder
lcl|BLLF01003368.1_cds_GFH27157.1_21634 HaLaN_25432, GFH27157 Histone methyltransferase 0.03 OrthoFinder
lcl|BLLF01003634.1_cds_GFH27819.1_22296 HaLaN_26201, GFH27819 Hypothetical protein 0.04 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8499807.1_8760 KAA8499807 SET domain [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEP Enrichment
BP GO:0001510 RNA methylation IEP Enrichment
BP GO:0002097 tRNA wobble base modification IEP Enrichment
BP GO:0002098 tRNA wobble uridine modification IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003879 ATP phosphoribosyltransferase activity IEP Enrichment
MF GO:0003883 CTP synthase activity IEP Enrichment
MF GO:0004402 histone acetyltransferase activity IEP Enrichment
MF GO:0004425 indole-3-glycerol-phosphate synthase activity IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
CC GO:0005730 nucleolus IEP Enrichment
CC GO:0005737 cytoplasm IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006220 pyrimidine nucleotide metabolic process IEP Enrichment
BP GO:0006221 pyrimidine nucleotide biosynthetic process IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
BP GO:0006360 transcription by RNA polymerase I IEP Enrichment
BP GO:0006364 rRNA processing IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006400 tRNA modification IEP Enrichment
BP GO:0006547 histidine metabolic process IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0008033 tRNA processing IEP Enrichment
MF GO:0008080 N-acetyltransferase activity IEP Enrichment
MF GO:0008168 methyltransferase activity IEP Enrichment
BP GO:0009451 RNA modification IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
BP GO:0016072 rRNA metabolic process IEP Enrichment
MF GO:0016407 acetyltransferase activity IEP Enrichment
MF GO:0016410 N-acyltransferase activity IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
MF GO:0016763 pentosyltransferase activity IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
BP GO:0030488 tRNA methylation IEP Enrichment
CC GO:0030684 preribosome IEP Enrichment
CC GO:0031515 tRNA (m1A) methyltransferase complex IEP Enrichment
CC GO:0032040 small-subunit processome IEP Enrichment
BP GO:0032259 methylation IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
CC GO:0033588 elongator holoenzyme complex IEP Enrichment
MF GO:0034212 peptide N-acetyltransferase activity IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
CC GO:0034708 methyltransferase complex IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043527 tRNA methyltransferase complex IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Enrichment
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Enrichment
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
CC GO:1990904 ribonucleoprotein complex IEP Enrichment
InterPro domains Description Start Stop
IPR001214 SET_dom 11 232
No external refs found!