Description : SAM-dependent methyltransferase RsmB/NOP2-type [Interproscan].
Gene families : OG_01_0000532 (OrthoFinder) Phylogenetic Tree(s): OG0000532_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: PTI_17G01790.1 | |
Cluster | HCCA: Cluster_92 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Cre03.g179860 | 30786956 | RNA processing.RNA modification.rRNA/tRNA... | 0.04 | OrthoFinder | |
Cz01g45120.t1 | No alias | Hypothetical protein | 0.01 | OrthoFinder | |
Sro107_g053980.1 | Contig1548.g14073 | Multisite-specific tRNA:(cytosine-C(5))-methyltransferase trm4a | 0.02 | OrthoFinder | |
Transcript_contig_57256 | 57256 | SAM-dependent methyltransferase RsmB/NOP2-type [Interproscan]. | 0.01 | OrthoFinder | |
Transcript_contig_59270 | 59270 | Hypothetical protein | 0.01 | OrthoFinder | |
XM_002503226.1 | MICPUN_59410, 59410 | SAM-dependent methyltransferase RsmB/NOP2-type; CCT... | 0.02 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0008168 | methyltransferase activity | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEP | Enrichment |
MF | GO:0003676 | nucleic acid binding | IEP | Enrichment |
MF | GO:0003682 | chromatin binding | IEP | Enrichment |
MF | GO:0004748 | ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor | IEP | Enrichment |
MF | GO:0005488 | binding | IEP | Enrichment |
MF | GO:0005524 | ATP binding | IEP | Enrichment |
CC | GO:0005777 | peroxisome | IEP | Enrichment |
BP | GO:0006260 | DNA replication | IEP | Enrichment |
BP | GO:0006996 | organelle organization | IEP | Enrichment |
BP | GO:0007031 | peroxisome organization | IEP | Enrichment |
MF | GO:0016725 | oxidoreductase activity, acting on CH or CH2 groups | IEP | Enrichment |
MF | GO:0016728 | oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor | IEP | Enrichment |
MF | GO:0017076 | purine nucleotide binding | IEP | Enrichment |
MF | GO:0030554 | adenyl nucleotide binding | IEP | Enrichment |
MF | GO:0032553 | ribonucleotide binding | IEP | Enrichment |
MF | GO:0032555 | purine ribonucleotide binding | IEP | Enrichment |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Enrichment |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Enrichment |
MF | GO:0036094 | small molecule binding | IEP | Enrichment |
CC | GO:0042579 | microbody | IEP | Enrichment |
MF | GO:0043167 | ion binding | IEP | Enrichment |
MF | GO:0043168 | anion binding | IEP | Enrichment |
MF | GO:0061731 | ribonucleoside-diphosphate reductase activity | IEP | Enrichment |
MF | GO:0097159 | organic cyclic compound binding | IEP | Enrichment |
MF | GO:0097367 | carbohydrate derivative binding | IEP | Enrichment |
MF | GO:1901265 | nucleoside phosphate binding | IEP | Enrichment |
MF | GO:1901363 | heterocyclic compound binding | IEP | Enrichment |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001678 | MeTrfase_RsmB/NOP2 | 239 | 390 |
No external refs found! |