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  5. PTI_16G02510.1

PTI_16G02510.1


Description : Reverse transcriptase, RNA-dependent DNA polymerase [Interproscan].


Gene families : OG_01_0000066 (OrthoFinder) Phylogenetic Tree(s): OG0000066_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_16G02510.1
Cluster HCCA: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
PTI_00G00190.1 No alias Hypothetical protein 0.06 OrthoFinder
PTI_00G01600.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.09 OrthoFinder
PTI_00G01650.1 No alias Hypothetical protein 0.03 OrthoFinder
PTI_00G01660.1 No alias Hypothetical protein 0.04 OrthoFinder
PTI_00G01920.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.08 OrthoFinder
PTI_00G02170.1 No alias Hypothetical protein 0.06 OrthoFinder
PTI_00G02180.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.03 OrthoFinder
PTI_00G02190.1 No alias Hypothetical protein 0.17 OrthoFinder
PTI_00G02240.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.18 OrthoFinder
PTI_00G02270.1 No alias Hypothetical protein 0.11 OrthoFinder
PTI_00G02280.1 No alias Hypothetical protein 0.12 OrthoFinder
PTI_00G02470.1 No alias Hypothetical protein 0.08 OrthoFinder
PTI_00G02490.1 No alias Hypothetical protein 0.04 OrthoFinder
PTI_00G04600.1 No alias Hypothetical protein 0.09 OrthoFinder
PTI_00G04610.1 No alias Hypothetical protein 0.07 OrthoFinder
PTI_01G01660.1 No alias Hypothetical protein 0.09 OrthoFinder
PTI_01G08060.1 No alias Hypothetical protein 0.21 OrthoFinder
PTI_01G08070.1 No alias Hypothetical protein 0.14 OrthoFinder
PTI_01G08080.1 No alias Hypothetical protein 0.09 OrthoFinder
PTI_01G11800.1 No alias Hypothetical protein 0.21 OrthoFinder
PTI_01G11820.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.18 OrthoFinder
PTI_03G00510.1 No alias Hypothetical protein 0.19 OrthoFinder
PTI_03G00520.1 No alias Hypothetical protein 0.06 OrthoFinder
PTI_03G04550.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.06 OrthoFinder
PTI_03G05880.1 No alias Hypothetical protein 0.05 OrthoFinder
PTI_03G05910.1 No alias Hypothetical protein 0.08 OrthoFinder
PTI_03G05920.1 No alias Hypothetical protein 0.23 OrthoFinder
PTI_03G05930.1 No alias Hypothetical protein 0.08 OrthoFinder
PTI_03G05950.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.08 OrthoFinder
PTI_03G05970.1 No alias Hypothetical protein 0.13 OrthoFinder
PTI_04G00260.1 No alias Hypothetical protein 0.07 OrthoFinder
PTI_05G04520.1 No alias Hypothetical protein 0.08 OrthoFinder
PTI_06G01810.1 No alias Hypothetical protein 0.17 OrthoFinder
PTI_06G02350.1 No alias Hypothetical protein 0.08 OrthoFinder
PTI_06G03610.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.15 OrthoFinder
PTI_08G00150.1 No alias Hypothetical protein 0.04 OrthoFinder
PTI_08G00160.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.12 OrthoFinder
PTI_09G00400.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.18 OrthoFinder
PTI_09G01520.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.08 OrthoFinder
PTI_09G01550.1 No alias Hypothetical protein 0.06 OrthoFinder
PTI_09G01560.1 No alias Hypothetical protein 0.07 OrthoFinder
PTI_09G02860.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.13 OrthoFinder
PTI_09G02870.1 No alias Hypothetical protein 0.14 OrthoFinder
PTI_10G01700.1 No alias Hypothetical protein 0.06 OrthoFinder
PTI_11G04470.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.12 OrthoFinder
PTI_12G00290.1 No alias Hypothetical protein 0.05 OrthoFinder
PTI_12G02220.1 No alias Hypothetical protein 0.08 OrthoFinder
PTI_12G02230.1 No alias Hypothetical protein 0.15 OrthoFinder
PTI_15G00010.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.07 OrthoFinder
PTI_16G00090.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.05 OrthoFinder
PTI_16G00100.1 No alias Hypothetical protein 0.08 OrthoFinder
PTI_16G00110.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.06 OrthoFinder
PTI_16G00750.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.2 OrthoFinder
PTI_17G00090.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.04 OrthoFinder
PTI_17G02300.1 No alias Hypothetical protein 0.14 OrthoFinder
PTI_18G01250.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.18 OrthoFinder
PTI_18G02830.1 No alias Hypothetical protein 0.07 OrthoFinder
PTI_18G02840.1 No alias Hypothetical protein 0.12 OrthoFinder
PTI_18G02900.1 No alias Hypothetical protein 0.07 OrthoFinder
PTI_18G02920.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.2 OrthoFinder
PTI_19G03110.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.14 OrthoFinder
PTI_20G00030.1 No alias Hypothetical protein 0.07 OrthoFinder
PTI_20G00040.1 No alias Hypothetical protein 0.07 OrthoFinder
PTI_20G00050.1 No alias Hypothetical protein 0.05 OrthoFinder
PTI_20G00060.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.05 OrthoFinder
PTI_20G00070.1 No alias Hypothetical protein 0.07 OrthoFinder
PTI_22G02660.1 No alias Hypothetical protein 0.05 OrthoFinder
PTI_22G02670.1 No alias Hypothetical protein 0.05 OrthoFinder
PTI_23G02270.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.12 OrthoFinder
PTI_24G00370.1 No alias Hypothetical protein 0.1 OrthoFinder
PTI_24G01650.1 No alias Hypothetical protein 0.15 OrthoFinder
PTI_25G00030.1 No alias Hypothetical protein 0.08 OrthoFinder
PTI_27G00060.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.17 OrthoFinder
PTI_27G01660.1 No alias Hypothetical protein 0.12 OrthoFinder
PTI_27G01670.1 No alias Hypothetical protein 0.11 OrthoFinder
PTI_29G00070.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.1 OrthoFinder
PTI_31G00090.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.17 OrthoFinder
PTI_31G00950.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.17 OrthoFinder
PTI_31G00960.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.19 OrthoFinder
PTI_33G00250.1 No alias Hypothetical protein 0.08 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR013103 RVT_2 12 145
No external refs found!