PTI_16G01030.1

Description : ABC transporter-like; ABC-2 type transporter [Interproscan].

Gene families : OG_01_0000021 (OrthoFinder) Phylogenetic Tree(s): OG0000021_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: PTI_16G01030.1
Cluster	HCCA: Cluster_89

Target	Alias	Description	ECC score	Gene Family Method
Cre01.g029900	30788563	No description available	0.02	OrthoFinder
Sro538_g162620.1	Contig95.g1103	Putative white-brown complex homolog protein 30	0.03	OrthoFinder
Sro997_g229380.1	Contig4588.g34260	Putative white-brown complex homolog protein 30	0.03	OrthoFinder
Transcript_contig_69264	69264	ABC transporter-like [Interproscan].	0.01	OrthoFinder
Transcript_contig_89293	89293	ABC-2 type transporter; ABC transporter-like [Interproscan].	0.02	OrthoFinder
XM_003054877.1	MicpuC2_37849, 37849	ATP-binding cassette superfamily	0.03	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0016887	ATPase	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004888	transmembrane signaling receptor activity	IEP	Enrichment
MF	GO:0004930	G protein-coupled receptor activity	IEP	Enrichment
CC	GO:0005737	cytoplasm	IEP	Enrichment
BP	GO:0007186	G protein-coupled receptor signaling pathway	IEP	Enrichment
MF	GO:0008199	ferric iron binding	IEP	Enrichment
BP	GO:0016226	iron-sulfur cluster assembly	IEP	Enrichment
BP	GO:0031163	metallo-sulfur cluster assembly	IEP	Enrichment
BP	GO:0032879	regulation of localization	IEP	Enrichment
BP	GO:0032880	regulation of protein localization	IEP	Enrichment
MF	GO:0038023	signaling receptor activity	IEP	Enrichment
BP	GO:0050708	regulation of protein secretion	IEP	Enrichment
BP	GO:0050789	regulation of biological process	IEP	Enrichment
BP	GO:0050794	regulation of cellular process	IEP	Enrichment
BP	GO:0051046	regulation of secretion	IEP	Enrichment
BP	GO:0051049	regulation of transport	IEP	Enrichment
BP	GO:0051223	regulation of protein transport	IEP	Enrichment
MF	GO:0060089	molecular transducer activity	IEP	Enrichment
BP	GO:0065007	biological regulation	IEP	Enrichment
BP	GO:0070201	regulation of establishment of protein localization	IEP	Enrichment
BP	GO:1903530	regulation of secretion by cell	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR013525	ABC_2_trans	364	572
IPR003439	ABC_transporter-like_ATP-bd	64	221

External Links

No external refs found!